Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ZNF428Q96B54 AL035685.1-201ENST00000636663 812 ntBASIC30.7■■■□□ 2.51
ZNF428Q96B54 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ZNF428Q96B54 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
ZNF428Q96B54 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZNF428Q96B54 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.69■■■□□ 2.5
ZNF428Q96B54 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
ZNF428Q96B54 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.69■■■□□ 2.5
ZNF428Q96B54 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZNF428Q96B54 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZNF428Q96B54 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZNF428Q96B54 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.67■■■□□ 2.5
ZNF428Q96B54 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ZNF428Q96B54 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZNF428Q96B54 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZNF428Q96B54 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.66■■■□□ 2.5
ZNF428Q96B54 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZNF428Q96B54 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ZNF428Q96B54 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
ZNF428Q96B54 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ZNF428Q96B54 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ZNF428Q96B54 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.65■■■□□ 2.5
ZNF428Q96B54 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.64■■■□□ 2.5
ZNF428Q96B54 RPS2P7-201ENST00000447334 885 ntBASIC30.64■■■□□ 2.5
ZNF428Q96B54 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
ZNF428Q96B54 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ZNF428Q96B54 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ZNF428Q96B54 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZNF428Q96B54 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZNF428Q96B54 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZNF428Q96B54 AC087393.1-201ENST00000582896 145 ntBASIC30.62■■■□□ 2.49
ZNF428Q96B54 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.62■■■□□ 2.49
ZNF428Q96B54 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.61■■■□□ 2.49
ZNF428Q96B54 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ZNF428Q96B54 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZNF428Q96B54 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZNF428Q96B54 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZNF428Q96B54 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.6■■■□□ 2.49
ZNF428Q96B54 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.6■■■□□ 2.49
ZNF428Q96B54 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ZNF428Q96B54 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZNF428Q96B54 YBX1P4-201ENST00000392794 808 ntBASIC30.59■■■□□ 2.49
ZNF428Q96B54 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ZNF428Q96B54 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZNF428Q96B54 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.59■■■□□ 2.49
ZNF428Q96B54 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ZNF428Q96B54 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.58■■■□□ 2.49
ZNF428Q96B54 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ZNF428Q96B54 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ZNF428Q96B54 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.57■■■□□ 2.48
ZNF428Q96B54 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ZNF428Q96B54 AC009299.2-201ENST00000482477 511 ntBASIC30.57■■■□□ 2.48
ZNF428Q96B54 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.57■■■□□ 2.48
ZNF428Q96B54 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.57■■■□□ 2.48
ZNF428Q96B54 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
ZNF428Q96B54 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ZNF428Q96B54 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ZNF428Q96B54 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
ZNF428Q96B54 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ZNF428Q96B54 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.56■■■□□ 2.48
ZNF428Q96B54 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ZNF428Q96B54 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 AC020928.2-201ENST00000588717 2197 ntBASIC30.55■■■□□ 2.48
ZNF428Q96B54 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZNF428Q96B54 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 AC074183.2-201ENST00000623112 922 ntBASIC30.55■■■□□ 2.48
ZNF428Q96B54 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.55■■■□□ 2.48
ZNF428Q96B54 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZNF428Q96B54 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZNF428Q96B54 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZNF428Q96B54 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ZNF428Q96B54 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ZNF428Q96B54 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ZNF428Q96B54 AC103724.3-201ENST00000564481 992 ntBASIC30.54■■■□□ 2.48
ZNF428Q96B54 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ZNF428Q96B54 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ZNF428Q96B54 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.54■■■□□ 2.48
ZNF428Q96B54 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.53■■■□□ 2.48
ZNF428Q96B54 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.53■■■□□ 2.48
ZNF428Q96B54 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZNF428Q96B54 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ZNF428Q96B54 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
ZNF428Q96B54 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ZNF428Q96B54 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ZNF428Q96B54 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.51■■■□□ 2.48
ZNF428Q96B54 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms