Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCR9P51686 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCR9P51686 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCR9P51686 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCR9P51686 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCR9P51686 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCR9P51686 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCR9P51686 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCR9P51686 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCR9P51686 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCR9P51686 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCR9P51686 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCR9P51686 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCR9P51686 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCR9P51686 LINC01124-201ENST00000409786 2117 ntBASIC20.82■□□□□ 0.92
CCR9P51686 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.82■□□□□ 0.92
CCR9P51686 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCR9P51686 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCR9P51686 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCR9P51686 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCR9P51686 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCR9P51686 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCR9P51686 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCR9P51686 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCR9P51686 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCR9P51686 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.8■□□□□ 0.92
CCR9P51686 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.8■□□□□ 0.92
CCR9P51686 MIR3648-2-201ENST00000581792 180 ntBASIC20.8■□□□□ 0.92
CCR9P51686 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.8■□□□□ 0.92
CCR9P51686 MIR3648-1-201ENST00000615959 180 ntBASIC20.8■□□□□ 0.92
CCR9P51686 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.79■□□□□ 0.92
CCR9P51686 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.79■□□□□ 0.92
CCR9P51686 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.79■□□□□ 0.92
CCR9P51686 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.79■□□□□ 0.92
CCR9P51686 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCR9P51686 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCR9P51686 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCR9P51686 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
CCR9P51686 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.78■□□□□ 0.92
CCR9P51686 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCR9P51686 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.78■□□□□ 0.92
CCR9P51686 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCR9P51686 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCR9P51686 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCR9P51686 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCR9P51686 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CCR9P51686 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.77■□□□□ 0.92
CCR9P51686 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 LINC00543-201ENST00000567234 1845 ntBASIC20.77■□□□□ 0.92
CCR9P51686 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCR9P51686 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.77■□□□□ 0.92
CCR9P51686 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCR9P51686 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCR9P51686 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCR9P51686 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
CCR9P51686 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.76■□□□□ 0.91
CCR9P51686 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCR9P51686 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCR9P51686 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
CCR9P51686 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 AC025884.2-201ENST00000553429 711 ntBASIC20.75■□□□□ 0.91
CCR9P51686 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CCR9P51686 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCR9P51686 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCR9P51686 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCR9P51686 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCR9P51686 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCR9P51686 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCR9P51686 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.74■□□□□ 0.91
CCR9P51686 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCR9P51686 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCR9P51686 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CCR9P51686 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCR9P51686 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.73■□□□□ 0.91
CCR9P51686 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.73■□□□□ 0.91
CCR9P51686 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCR9P51686 ABHD17AP4-201ENST00000411545 909 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms