Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.14■□□□□ 0.81
MECP2P51608 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MECP2P51608 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
MECP2P51608 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MECP2P51608 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.13■□□□□ 0.81
MECP2P51608 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MECP2P51608 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.12■□□□□ 0.81
MECP2P51608 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MECP2P51608 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MECP2P51608 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.12■□□□□ 0.81
MECP2P51608 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MECP2P51608 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MECP2P51608 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MECP2P51608 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MECP2P51608 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MECP2P51608 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MECP2P51608 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MECP2P51608 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
MECP2P51608 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
MECP2P51608 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
MECP2P51608 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MECP2P51608 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MECP2P51608 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MECP2P51608 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.11■□□□□ 0.81
MECP2P51608 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.11■□□□□ 0.81
MECP2P51608 AC044849.2-201ENST00000606596 710 ntBASIC20.11■□□□□ 0.81
MECP2P51608 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.11■□□□□ 0.81
MECP2P51608 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.1■□□□□ 0.81
MECP2P51608 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MECP2P51608 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MECP2P51608 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MECP2P51608 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MECP2P51608 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MECP2P51608 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MECP2P51608 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MECP2P51608 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MECP2P51608 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.09■□□□□ 0.81
MECP2P51608 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MECP2P51608 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MECP2P51608 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MECP2P51608 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MECP2P51608 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.08■□□□□ 0.81
MECP2P51608 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MECP2P51608 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
MECP2P51608 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MECP2P51608 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MECP2P51608 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MECP2P51608 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.07■□□□□ 0.8
MECP2P51608 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.07■□□□□ 0.8
MECP2P51608 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MECP2P51608 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.07■□□□□ 0.8
MECP2P51608 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MECP2P51608 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.07■□□□□ 0.8
MECP2P51608 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MECP2P51608 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MECP2P51608 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
MECP2P51608 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
MECP2P51608 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MECP2P51608 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MECP2P51608 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MECP2P51608 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
MECP2P51608 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.05■□□□□ 0.8
MECP2P51608 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MECP2P51608 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MECP2P51608 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.05■□□□□ 0.8
MECP2P51608 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MECP2P51608 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.04■□□□□ 0.8
MECP2P51608 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MECP2P51608 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.04■□□□□ 0.8
MECP2P51608 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MECP2P51608 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MECP2P51608 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MECP2P51608 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MECP2P51608 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MECP2P51608 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.04■□□□□ 0.8
MECP2P51608 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MECP2P51608 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MECP2P51608 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MECP2P51608 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MECP2P51608 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MECP2P51608 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.03■□□□□ 0.8
MECP2P51608 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MECP2P51608 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.03■□□□□ 0.8
MECP2P51608 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.03■□□□□ 0.8
MECP2P51608 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MECP2P51608 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.02■□□□□ 0.8
MECP2P51608 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms