Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL3P19876 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.96■□□□□ 0.79
CXCL3P19876 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.96■□□□□ 0.79
CXCL3P19876 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL3P19876 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL3P19876 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CXCL3P19876 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL3P19876 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL3P19876 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.95■□□□□ 0.78
CXCL3P19876 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.95■□□□□ 0.78
CXCL3P19876 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL3P19876 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CXCL3P19876 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CXCL3P19876 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.94■□□□□ 0.78
CXCL3P19876 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.94■□□□□ 0.78
CXCL3P19876 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.94■□□□□ 0.78
CXCL3P19876 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL3P19876 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL3P19876 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL3P19876 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL3P19876 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CXCL3P19876 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CXCL3P19876 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCL3P19876 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CXCL3P19876 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.92■□□□□ 0.78
CXCL3P19876 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL3P19876 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL3P19876 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL3P19876 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.92■□□□□ 0.78
CXCL3P19876 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL3P19876 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CXCL3P19876 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CXCL3P19876 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.91■□□□□ 0.78
CXCL3P19876 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL3P19876 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CXCL3P19876 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.91■□□□□ 0.78
CXCL3P19876 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CXCL3P19876 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCL3P19876 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 RARRES2P7-201ENST00000567349 469 ntBASIC19.9■□□□□ 0.78
CXCL3P19876 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.9■□□□□ 0.78
CXCL3P19876 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL3P19876 AC233723.2-201ENST00000623798 2106 ntBASIC19.9■□□□□ 0.78
CXCL3P19876 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL3P19876 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL3P19876 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL3P19876 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL3P19876 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CXCL3P19876 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL3P19876 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL3P19876 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CXCL3P19876 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL3P19876 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CXCL3P19876 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 SETD8P1-201ENST00000623146 1180 ntBASIC19.86■□□□□ 0.77
CXCL3P19876 SLC6A10P-202ENST00000431994 2058 ntBASIC19.86■□□□□ 0.77
CXCL3P19876 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL3P19876 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCL3P19876 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CXCL3P19876 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL3P19876 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL3P19876 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCL3P19876 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.85■□□□□ 0.77
CXCL3P19876 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CXCL3P19876 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.84■□□□□ 0.77
CXCL3P19876 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCL3P19876 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCL3P19876 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms