Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
CCNYL3P0C7X3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CCNYL3P0C7X3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 AC022616.5-201ENST00000518796 181 ntBASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCNYL3P0C7X3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 GUSBP5-201ENST00000418136 578 ntBASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCNYL3P0C7X3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 AC142472.1-201ENST00000612013 1741 ntBASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCNYL3P0C7X3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CCNYL3P0C7X3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.76■■□□□ 1.23
CCNYL3P0C7X3 AC131212.1-201ENST00000613771 668 ntBASIC22.76■■□□□ 1.23
CCNYL3P0C7X3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.76■■□□□ 1.23
CCNYL3P0C7X3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
CCNYL3P0C7X3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
CCNYL3P0C7X3 AC239859.2-201ENST00000444165 318 ntBASIC22.75■■□□□ 1.23
CCNYL3P0C7X3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 Z92544.1-202ENST00000571933 1220 ntBASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCNYL3P0C7X3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.73■■□□□ 1.23
CCNYL3P0C7X3 AC145676.1-201ENST00000514988 2004 ntBASIC22.72■■□□□ 1.23
CCNYL3P0C7X3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CCNYL3P0C7X3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCNYL3P0C7X3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.72■■□□□ 1.23
CCNYL3P0C7X3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CCNYL3P0C7X3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 THA1P-201ENST00000590384 1145 ntBASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCNYL3P0C7X3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCNYL3P0C7X3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.7■■□□□ 1.23
CCNYL3P0C7X3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CCNYL3P0C7X3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 KRT125P-201ENST00000546827 989 ntBASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.69■■□□□ 1.22
CCNYL3P0C7X3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNYL3P0C7X3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCNYL3P0C7X3 BX664725.1-201ENST00000438252 379 ntBASIC22.67■■□□□ 1.22
CCNYL3P0C7X3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.67■■□□□ 1.22
CCNYL3P0C7X3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNYL3P0C7X3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCNYL3P0C7X3 AC092803.2-201ENST00000564287 1899 ntBASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 AL592295.1-201ENST00000400984 884 ntBASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 AL356441.2-201ENST00000443009 864 ntBASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.66■■□□□ 1.22
CCNYL3P0C7X3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms