Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AC010501.1-201ENST00000606270 1962 ntBASIC19.76■□□□□ 0.75
GAPDHP04406 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAPDHP04406 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GAPDHP04406 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GAPDHP04406 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GAPDHP04406 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAPDHP04406 AC068473.5-201ENST00000616428 2072 ntBASIC19.75■□□□□ 0.75
GAPDHP04406 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GAPDHP04406 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.75■□□□□ 0.75
GAPDHP04406 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.75■□□□□ 0.75
GAPDHP04406 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAPDHP04406 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GAPDHP04406 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
GAPDHP04406 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.74■□□□□ 0.75
GAPDHP04406 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GAPDHP04406 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 AC025884.2-201ENST00000553429 711 ntBASIC19.74■□□□□ 0.75
GAPDHP04406 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.74■□□□□ 0.75
GAPDHP04406 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.74■□□□□ 0.75
GAPDHP04406 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAPDHP04406 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.73■□□□□ 0.75
GAPDHP04406 MIR3960-201ENST00000583311 91 ntBASIC19.73■□□□□ 0.75
GAPDHP04406 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAPDHP04406 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAPDHP04406 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAPDHP04406 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GAPDHP04406 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAPDHP04406 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.72■□□□□ 0.75
GAPDHP04406 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAPDHP04406 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GAPDHP04406 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.71■□□□□ 0.75
GAPDHP04406 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.71■□□□□ 0.75
GAPDHP04406 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAPDHP04406 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GAPDHP04406 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GAPDHP04406 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.7■□□□□ 0.74
GAPDHP04406 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.7■□□□□ 0.74
GAPDHP04406 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.7■□□□□ 0.74
GAPDHP04406 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GAPDHP04406 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GAPDHP04406 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
GAPDHP04406 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GAPDHP04406 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GAPDHP04406 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.69■□□□□ 0.74
GAPDHP04406 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
GAPDHP04406 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GAPDHP04406 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
GAPDHP04406 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GAPDHP04406 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GAPDHP04406 RNF126P1-201ENST00000567452 1320 ntBASIC19.69■□□□□ 0.74
GAPDHP04406 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GAPDHP04406 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GAPDHP04406 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GAPDHP04406 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.68■□□□□ 0.74
GAPDHP04406 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.68■□□□□ 0.74
GAPDHP04406 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.68■□□□□ 0.74
GAPDHP04406 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GAPDHP04406 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.67■□□□□ 0.74
GAPDHP04406 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GAPDHP04406 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
GAPDHP04406 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GAPDHP04406 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.66■□□□□ 0.74
GAPDHP04406 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GAPDHP04406 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GAPDHP04406 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GAPDHP04406 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GAPDHP04406 RP9P-202ENST00000450133 1212 ntBASIC19.65■□□□□ 0.74
GAPDHP04406 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.65■□□□□ 0.74
GAPDHP04406 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GAPDHP04406 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.65■□□□□ 0.74
GAPDHP04406 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.64■□□□□ 0.74
GAPDHP04406 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
GAPDHP04406 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.64■□□□□ 0.73
GAPDHP04406 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.64■□□□□ 0.73
GAPDHP04406 AC007029.1-201ENST00000604183 313 ntBASIC19.64■□□□□ 0.73
GAPDHP04406 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GAPDHP04406 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.64■□□□□ 0.73
GAPDHP04406 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GAPDHP04406 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms