Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3DO95716 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3DO95716 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB3DO95716 MIR3665-201ENST00000578708 105 ntBASIC20.08■□□□□ 0.81
RAB3DO95716 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3DO95716 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
RAB3DO95716 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3DO95716 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB3DO95716 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAB3DO95716 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3DO95716 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3DO95716 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3DO95716 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB3DO95716 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3DO95716 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3DO95716 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAB3DO95716 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAB3DO95716 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB3DO95716 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3DO95716 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3DO95716 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB3DO95716 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3DO95716 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RAB3DO95716 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RAB3DO95716 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3DO95716 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3DO95716 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3DO95716 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3DO95716 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB3DO95716 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RAB3DO95716 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.04■□□□□ 0.8
RAB3DO95716 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAB3DO95716 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3DO95716 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3DO95716 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3DO95716 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3DO95716 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB3DO95716 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3DO95716 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3DO95716 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3DO95716 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3DO95716 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3DO95716 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB3DO95716 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAB3DO95716 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB3DO95716 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAB3DO95716 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3DO95716 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20■□□□□ 0.79
RAB3DO95716 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3DO95716 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB3DO95716 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
RAB3DO95716 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3DO95716 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.99■□□□□ 0.79
RAB3DO95716 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
RAB3DO95716 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3DO95716 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3DO95716 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3DO95716 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3DO95716 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB3DO95716 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3DO95716 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
RAB3DO95716 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3DO95716 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3DO95716 AL359504.2-201ENST00000605506 1601 ntBASIC19.98■□□□□ 0.79
RAB3DO95716 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3DO95716 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB3DO95716 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RAB3DO95716 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.97■□□□□ 0.79
RAB3DO95716 AC004812.2-201ENST00000611079 2094 ntBASIC19.97■□□□□ 0.79
RAB3DO95716 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3DO95716 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms