Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC12.56□□□□□ -0.43e-6■■■■□ 26.7
SMNDC1O75940 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.423e-6■■■■□ 26.7
SMNDC1O75940 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.4□□□□□ -0.421e-11■■■■□ 26.7
SMNDC1O75940 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.463e-6■■■■□ 26.7
SMNDC1O75940 GAPDH-209ENST00000492719 930 ntTSL 311.98□□□□□ -0.493e-6■■■■□ 26.7
SMNDC1O75940 GAPDH-208ENST00000474249 1333 ntTSL 511.93□□□□□ -0.53e-6■■■■□ 26.7
SMNDC1O75940 POLG-221ENST00000637238 3022 ntTSL 511.9□□□□□ -0.53e-6■■■■□ 26.7
SMNDC1O75940 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.87□□□□□ -0.513e-6■■■■□ 26.7
SMNDC1O75940 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC11.73□□□□□ -0.533e-6■■■■□ 26.7
SMNDC1O75940 MAD1L1-222ENST00000491858 494 ntTSL 411.69□□□□□ -0.549e-9■■■■□ 26.7
SMNDC1O75940 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.551e-11■■■■□ 26.7
SMNDC1O75940 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.561e-6■■■■□ 26.7
SMNDC1O75940 POLG-222ENST00000637264 3153 ntTSL 511.51□□□□□ -0.573e-6■■■■□ 26.7
SMNDC1O75940 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC11.5□□□□□ -0.571e-11■■■■□ 26.7
SMNDC1O75940 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.573e-6■■■■□ 26.7
SMNDC1O75940 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.596e-7■■■■□ 26.7
SMNDC1O75940 GSE1-215ENST00000635906 666 ntTSL 311.36□□□□□ -0.599e-7■■■■□ 26.7
SMNDC1O75940 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC11.33□□□□□ -0.63e-6■■■■□ 26.7
SMNDC1O75940 ADD1-218ENST00000513762 3581 ntTSL 311.23□□□□□ -0.611e-16■■■■□ 26.7
SMNDC1O75940 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC11.19□□□□□ -0.621e-11■■■■□ 26.7
SMNDC1O75940 SECISBP2-203ENST00000425851 826 ntTSL 311.1□□□□□ -0.633e-6■■■■□ 26.7
SMNDC1O75940 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC11.09□□□□□ -0.636e-7■■■■□ 26.7
SMNDC1O75940 ADD1-227ENST00000541051 975 ntTSL 211□□□□□ -0.651e-16■■■■□ 26.7
SMNDC1O75940 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.653e-7■■■■□ 26.7
SMNDC1O75940 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC10.9□□□□□ -0.663e-6■■■■□ 26.7
SMNDC1O75940 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC10.87□□□□□ -0.673e-6■■■■□ 26.7
SMNDC1O75940 SETD5-211ENST00000443339 3478 ntTSL 210.85□□□□□ -0.673e-6■■■■□ 26.7
SMNDC1O75940 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC10.65□□□□□ -0.76e-7■■■■□ 26.7
SMNDC1O75940 ADD1-219ENST00000514940 1332 ntTSL 510.61□□□□□ -0.711e-11■■■■□ 26.7
SMNDC1O75940 EIF4A1-218ENST00000581544 1444 ntTSL 210.5□□□□□ -0.736e-7■■■■□ 26.7
SMNDC1O75940 ADD1-221ENST00000536078 423 ntTSL 210.35□□□□□ -0.751e-11■■■■□ 26.7
SMNDC1O75940 ORC6-209ENST00000575571 771 ntTSL 310.11□□□□□ -0.793e-6■■■■□ 26.7
SMNDC1O75940 GAPDH-207ENST00000466588 1363 ntTSL 59.76□□□□□ -0.853e-6■■■■□ 26.7
SMNDC1O75940 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.873e-6■■■■□ 26.7
SMNDC1O75940 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC9.01□□□□□ -0.973e-7■■■■□ 26.7
SMNDC1O75940 EIF4A1-221ENST00000581841 621 ntTSL 28.91□□□□□ -0.983e-6■■■■□ 26.7
SMNDC1O75940 SECISBP2-206ENST00000477484 617 ntTSL 38.83□□□□□ -13e-6■■■■□ 26.7
SMNDC1O75940 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.42□□□□□ -1.063e-7■■■■□ 26.7
SMNDC1O75940 SETD5-202ENST00000399686 3362 ntTSL 58.01□□□□□ -1.133e-7■■■■□ 26.7
SMNDC1O75940 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.133e-7■■■■□ 26.7
SMNDC1O75940 SETD5-206ENST00000413704 3428 ntTSL 27.82□□□□□ -1.163e-7■■■■□ 26.7
SMNDC1O75940 EIF4A1-202ENST00000396527 1169 ntTSL 27.65□□□□□ -1.186e-7■■■■□ 26.7
SMNDC1O75940 SETD5-228ENST00000493918 4861 ntTSL 1 (best)7.26□□□□□ -1.253e-7■■■■□ 26.7
SMNDC1O75940 SECISBP2-204ENST00000440898 547 ntTSL 26.94□□□□□ -1.33e-6■■■■□ 26.7
SMNDC1O75940 HSP90AA1-210ENST00000560130 488 ntTSL 26.84□□□□□ -1.313e-6■■■■□ 26.7
SMNDC1O75940 SETD5-217ENST00000466242 4038 ntTSL 26.79□□□□□ -1.323e-7■■■■□ 26.7
SMNDC1O75940 FAM76B-206ENST00000538047 448 ntTSL 36.29□□□□□ -1.44e-7■■■■□ 26.7
SMNDC1O75940 SETD5-229ENST00000497213 552 ntTSL 44.08□□□□□ -1.763e-6■■■■□ 26.7
SMNDC1O75940 EIF4A1-220ENST00000581808 205 ntTSL 33.66□□□□□ -1.823e-6■■■■□ 26.7
SMNDC1O75940 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.923e-6■■■■□ 26.7
SMNDC1O75940 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.083e-6■■■■□ 26.7
SMNDC1O75940 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.08■□□□□ 0.161e-6■■■■□ 26.7
SMNDC1O75940 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.35■□□□□ 0.051e-6■■■■□ 26.7
SMNDC1O75940 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.29■□□□□ 0.041e-6■■■■□ 26.7
SMNDC1O75940 KMT2C-205ENST00000418673 682 ntTSL 510.83□□□□□ -0.683e-6■■■■□ 26.6
SMNDC1O75940 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.223e-6■■■■□ 26.6
SMNDC1O75940 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)7.44□□□□□ -1.223e-6■■■■□ 26.6
SMNDC1O75940 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.223e-6■■■■□ 26.6
SMNDC1O75940 KMT2C-208ENST00000473186 12854 ntTSL 1 (best)4.2□□□□□ -1.743e-6■■■■□ 26.6
SMNDC1O75940 PABPC4-216ENST00000492468 2257 ntTSL 216.11■□□□□ 0.175e-7■■■■□ 26.5
SMNDC1O75940 PABPC4-219ENST00000525045 765 ntTSL 212.79□□□□□ -0.365e-7■■■■□ 26.5
SMNDC1O75940 PABPC4-212ENST00000477556 413 ntTSL 311.88□□□□□ -0.515e-7■■■■□ 26.5
SMNDC1O75940 PABPC4-215ENST00000484555 450 ntTSL 511.25□□□□□ -0.615e-7■■■■□ 26.5
SMNDC1O75940 PABPC4-206ENST00000437136 876 ntTSL 511.06□□□□□ -0.645e-7■■■■□ 26.5
SMNDC1O75940 PABPC4-209ENST00000468476 3592 ntTSL 29.82□□□□□ -0.845e-7■■■■□ 26.5
SMNDC1O75940 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.481e-6■■■■□ 26.5
SMNDC1O75940 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.263e-6■■■■□ 26.5
SMNDC1O75940 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.193e-6■■■■□ 26.5
SMNDC1O75940 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.55□□□□□ -0.083e-6■■■■□ 26.5
SMNDC1O75940 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC12.81□□□□□ -0.363e-6■■■■□ 26.5
SMNDC1O75940 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.373e-6■■■■□ 26.5
SMNDC1O75940 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.59□□□□□ -0.393e-6■■■■□ 26.5
SMNDC1O75940 EIF4A1-219ENST00000581770 447 ntTSL 212.53□□□□□ -0.41e-6■■■■□ 26.5
SMNDC1O75940 CHID1-224ENST00000534254 1019 ntTSL 512.29□□□□□ -0.443e-6■■■■□ 26.5
SMNDC1O75940 CHID1-219ENST00000531859 834 ntTSL 511.66□□□□□ -0.543e-6■■■■□ 26.5
SMNDC1O75940 CHID1-207ENST00000524832 878 ntTSL 29.74□□□□□ -0.853e-6■■■■□ 26.5
SMNDC1O75940 CHID1-210ENST00000526714 976 ntTSL 59.65□□□□□ -0.863e-6■■■■□ 26.5
SMNDC1O75940 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.26■□□□□ 0.511e-10■■■■□ 26.4
SMNDC1O75940 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.331e-10■■■■□ 26.4
SMNDC1O75940 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-10■■■■□ 26.4
SMNDC1O75940 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.431e-10■■■■□ 26.4
SMNDC1O75940 STAT5A-203ENST00000468096 893 ntTSL 310.67□□□□□ -0.71e-10■■■■□ 26.4
SMNDC1O75940 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.575e-14■■■■□ 26.4
SMNDC1O75940 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.335e-14■■■■□ 26.4
SMNDC1O75940 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.391e-7■■■■□ 26.4
SMNDC1O75940 CD81-216ENST00000531840 5235 ntTSL 1 (best)17.49■□□□□ 0.391e-7■■■■□ 26.4
SMNDC1O75940 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.191e-7■■■■□ 26.4
SMNDC1O75940 MXD4-203ENST00000513372 4228 ntTSL 214.71□□□□□ -0.051e-7■■■■□ 26.4
SMNDC1O75940 PRKX-202ENST00000425240 669 ntTSL 513.96□□□□□ -0.171e-7■■■■□ 26.4
SMNDC1O75940 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC12.88□□□□□ -0.355e-14■■■■□ 26.4
SMNDC1O75940 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC12.51□□□□□ -0.415e-14■■■■□ 26.4
SMNDC1O75940 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC11.53□□□□□ -0.565e-14■■■■□ 26.4
SMNDC1O75940 MXD4-204ENST00000513380 624 ntTSL 511.25□□□□□ -0.611e-7■■■■□ 26.4
SMNDC1O75940 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC10.96□□□□□ -0.665e-14■■■■□ 26.4
SMNDC1O75940 ZNF692-217ENST00000495731 461 ntTSL 324.63■■□□□ 1.539e-8■■■■□ 26.4
SMNDC1O75940 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.489e-8■■■■□ 26.4
SMNDC1O75940 ZNF692-203ENST00000412341 1916 ntTSL 522.45■■□□□ 1.189e-8■■■■□ 26.4
SMNDC1O75940 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.889e-8■■■■□ 26.4
SMNDC1O75940 ZNF692-208ENST00000470787 1544 ntTSL 220.15■□□□□ 0.829e-8■■■■□ 26.4
SMNDC1O75940 ZNF692-226ENST00000533647 548 ntTSL 320.02■□□□□ 0.89e-8■■■■□ 26.4
Retrieved 100 of 11,362 protein–RNA pairs in 159.7 ms