RNA–Protein interactions for RNA: ENST00000531859.5

CHID1-219, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-219ENST00000531859 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
CHID1-219ENST00000531859 ABCC9O60706 1549 aa28.74■■■□□ 2.19
CHID1-219ENST00000531859 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
CHID1-219ENST00000531859 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
CHID1-219ENST00000531859 NACADO15069 1562 aa27.17■■□□□ 1.94
CHID1-219ENST00000531859 DCAF8L2P0C7V8 631 aa27.12■■□□□ 1.93
CHID1-219ENST00000531859 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
CHID1-219ENST00000531859 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
CHID1-219ENST00000531859 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
CHID1-219ENST00000531859 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
CHID1-219ENST00000531859 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
CHID1-219ENST00000531859 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
CHID1-219ENST00000531859 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
CHID1-219ENST00000531859 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
CHID1-219ENST00000531859 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
CHID1-219ENST00000531859 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
CHID1-219ENST00000531859 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
CHID1-219ENST00000531859 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
CHID1-219ENST00000531859 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
CHID1-219ENST00000531859 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CHID1-219ENST00000531859 SMARCA4P51532 1647 aa25■■□□□ 1.59
CHID1-219ENST00000531859 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
CHID1-219ENST00000531859 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
CHID1-219ENST00000531859 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
CHID1-219ENST00000531859 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CHID1-219ENST00000531859 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
CHID1-219ENST00000531859 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
CHID1-219ENST00000531859 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
CHID1-219ENST00000531859 NESP48681 1621 aa24.72■■□□□ 1.55
CHID1-219ENST00000531859 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
CHID1-219ENST00000531859 CUX2O14529 1486 aa24.7■■□□□ 1.55
CHID1-219ENST00000531859 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
CHID1-219ENST00000531859 WIZO95785 1651 aa24.43■■□□□ 1.5
CHID1-219ENST00000531859 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
CHID1-219ENST00000531859 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
CHID1-219ENST00000531859 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
CHID1-219ENST00000531859 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
CHID1-219ENST00000531859 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
CHID1-219ENST00000531859 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
CHID1-219ENST00000531859 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
CHID1-219ENST00000531859 CFTRP13569 1480 aa24.09■■□□□ 1.45
CHID1-219ENST00000531859 WDR62O43379 1518 aa24.09■■□□□ 1.45
CHID1-219ENST00000531859 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
CHID1-219ENST00000531859 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
CHID1-219ENST00000531859 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
CHID1-219ENST00000531859 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
CHID1-219ENST00000531859 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
CHID1-219ENST00000531859 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
CHID1-219ENST00000531859 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
CHID1-219ENST00000531859 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
CHID1-219ENST00000531859 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
CHID1-219ENST00000531859 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
CHID1-219ENST00000531859 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
CHID1-219ENST00000531859 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
CHID1-219ENST00000531859 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
CHID1-219ENST00000531859 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
CHID1-219ENST00000531859 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
CHID1-219ENST00000531859 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.341e-6■■■■■ 31.4
CHID1-219ENST00000531859 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
CHID1-219ENST00000531859 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
CHID1-219ENST00000531859 SOGA1O94964 1423 aa23.29■■□□□ 1.32
CHID1-219ENST00000531859 RIMBP3CA6NJZ7 1639 aa23.29■■□□□ 1.32
CHID1-219ENST00000531859 RIMBP3BA6NNM3 1639 aa23.29■■□□□ 1.32
CHID1-219ENST00000531859 RIMBP3Q9UFD9 1639 aa23.29■■□□□ 1.32
CHID1-219ENST00000531859 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
CHID1-219ENST00000531859 CUX1P39880 1505 aa23.24■■□□□ 1.31
CHID1-219ENST00000531859 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
CHID1-219ENST00000531859 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
CHID1-219ENST00000531859 FBLN2P98095 1184 aa23.22■■□□□ 1.31
CHID1-219ENST00000531859 CHD1O14646 1710 aa23.22■■□□□ 1.31
CHID1-219ENST00000531859 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
CHID1-219ENST00000531859 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
CHID1-219ENST00000531859 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
CHID1-219ENST00000531859 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
CHID1-219ENST00000531859 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
CHID1-219ENST00000531859 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
CHID1-219ENST00000531859 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
CHID1-219ENST00000531859 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
CHID1-219ENST00000531859 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
CHID1-219ENST00000531859 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
CHID1-219ENST00000531859 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
CHID1-219ENST00000531859 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
CHID1-219ENST00000531859 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
CHID1-219ENST00000531859 ABCA5Q8WWZ7 1642 aa22.91■■□□□ 1.26
CHID1-219ENST00000531859 WRNQ14191 1432 aaPredicted RBP eCLIP22.9■■□□□ 1.261e-9■■■■■ 46
CHID1-219ENST00000531859 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
CHID1-219ENST00000531859 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
CHID1-219ENST00000531859 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
CHID1-219ENST00000531859 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
CHID1-219ENST00000531859 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
CHID1-219ENST00000531859 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
CHID1-219ENST00000531859 NUP160Q12769 1436 aa22.7■■□□□ 1.22
CHID1-219ENST00000531859 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
CHID1-219ENST00000531859 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
CHID1-219ENST00000531859 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
CHID1-219ENST00000531859 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
CHID1-219ENST00000531859 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
CHID1-219ENST00000531859 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
CHID1-219ENST00000531859 IGF1RP08069 1367 aa22.47■■□□□ 1.19
CHID1-219ENST00000531859 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms