RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
PABPC4-216ENST00000492468 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
PABPC4-216ENST00000492468 HRCP23327 699 aa25.01■■□□□ 1.59
PABPC4-216ENST00000492468 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
PABPC4-216ENST00000492468 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
PABPC4-216ENST00000492468 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
PABPC4-216ENST00000492468 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
PABPC4-216ENST00000492468 PCGF6Q9BYE7 350 aa24.45■■□□□ 1.5
PABPC4-216ENST00000492468 PPARGC1BQ86YN6 1023 aaKnown RBP24.34■■□□□ 1.49
PABPC4-216ENST00000492468 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
PABPC4-216ENST00000492468 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
PABPC4-216ENST00000492468 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
PABPC4-216ENST00000492468 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
PABPC4-216ENST00000492468 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
PABPC4-216ENST00000492468 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
PABPC4-216ENST00000492468 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
PABPC4-216ENST00000492468 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
PABPC4-216ENST00000492468 ABCC9O60706 1549 aa23.41■■□□□ 1.34
PABPC4-216ENST00000492468 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
PABPC4-216ENST00000492468 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
PABPC4-216ENST00000492468 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
PABPC4-216ENST00000492468 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
PABPC4-216ENST00000492468 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
PABPC4-216ENST00000492468 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
PABPC4-216ENST00000492468 MYT1Q01538 1121 aa22.89■■□□□ 1.26
PABPC4-216ENST00000492468 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
PABPC4-216ENST00000492468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
PABPC4-216ENST00000492468 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
PABPC4-216ENST00000492468 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
PABPC4-216ENST00000492468 CCER1Q8TC90 406 aaPredicted RBP22.71■■□□□ 1.23
PABPC4-216ENST00000492468 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
PABPC4-216ENST00000492468 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
PABPC4-216ENST00000492468 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
PABPC4-216ENST00000492468 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
PABPC4-216ENST00000492468 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
PABPC4-216ENST00000492468 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
PABPC4-216ENST00000492468 WIZO95785 1651 aa22.46■■□□□ 1.19
PABPC4-216ENST00000492468 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
PABPC4-216ENST00000492468 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
PABPC4-216ENST00000492468 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
PABPC4-216ENST00000492468 NACADO15069 1562 aa22.27■■□□□ 1.16
PABPC4-216ENST00000492468 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
PABPC4-216ENST00000492468 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
PABPC4-216ENST00000492468 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
PABPC4-216ENST00000492468 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
PABPC4-216ENST00000492468 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
PABPC4-216ENST00000492468 MIER1Q8N108 512 aa22.11■■□□□ 1.13
PABPC4-216ENST00000492468 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
PABPC4-216ENST00000492468 EEA1Q15075 1411 aa22.1■■□□□ 1.13
PABPC4-216ENST00000492468 SOGA1O94964 1423 aa22.07■■□□□ 1.12
PABPC4-216ENST00000492468 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
PABPC4-216ENST00000492468 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
PABPC4-216ENST00000492468 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
PABPC4-216ENST00000492468 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
PABPC4-216ENST00000492468 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
PABPC4-216ENST00000492468 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
PABPC4-216ENST00000492468 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
PABPC4-216ENST00000492468 KIF21BO75037 1637 aa21.84■■□□□ 1.09
PABPC4-216ENST00000492468 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
PABPC4-216ENST00000492468 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
PABPC4-216ENST00000492468 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
PABPC4-216ENST00000492468 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
PABPC4-216ENST00000492468 CLIP1P30622 1438 aa21.74■■□□□ 1.07
PABPC4-216ENST00000492468 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
PABPC4-216ENST00000492468 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
PABPC4-216ENST00000492468 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
PABPC4-216ENST00000492468 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
PABPC4-216ENST00000492468 UNC13AQ9UPW8 1703 aa21.57■■□□□ 1.04
PABPC4-216ENST00000492468 ANP32EQ9BTT0 268 aa21.57■■□□□ 1.04
PABPC4-216ENST00000492468 APLP2Q06481 763 aa21.53■■□□□ 1.04
PABPC4-216ENST00000492468 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
PABPC4-216ENST00000492468 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
PABPC4-216ENST00000492468 CUX2O14529 1486 aa21.43■■□□□ 1.02
PABPC4-216ENST00000492468 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
PABPC4-216ENST00000492468 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
PABPC4-216ENST00000492468 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
PABPC4-216ENST00000492468 BCL11AQ9H165 835 aa21.32■■□□□ 1
PABPC4-216ENST00000492468 TOP2BQ02880 1626 aa21.3■■□□□ 1
PABPC4-216ENST00000492468 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
PABPC4-216ENST00000492468 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
PABPC4-216ENST00000492468 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
PABPC4-216ENST00000492468 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
PABPC4-216ENST00000492468 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
PABPC4-216ENST00000492468 MAPKBP1O60336 1514 aa21.22■□□□□ 0.99
PABPC4-216ENST00000492468 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
PABPC4-216ENST00000492468 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
PABPC4-216ENST00000492468 BCANQ96GW7 911 aa21.16■□□□□ 0.98
PABPC4-216ENST00000492468 FKBP8Q14318 412 aa21.16■□□□□ 0.98
PABPC4-216ENST00000492468 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
PABPC4-216ENST00000492468 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
PABPC4-216ENST00000492468 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
PABPC4-216ENST00000492468 WDR97A6NE52 1622 aa21.08■□□□□ 0.96
PABPC4-216ENST00000492468 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
PABPC4-216ENST00000492468 NEFLP07196 543 aa21.02■□□□□ 0.95
PABPC4-216ENST00000492468 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
PABPC4-216ENST00000492468 DDX10Q13206 875 aaKnown RBP21■□□□□ 0.95
PABPC4-216ENST00000492468 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
PABPC4-216ENST00000492468 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
PABPC4-216ENST00000492468 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
PABPC4-216ENST00000492468 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms