RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
PABPC4-215ENST00000484555 ABCC9O60706 1549 aa28.9■■■□□ 2.22
PABPC4-215ENST00000484555 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
PABPC4-215ENST00000484555 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
PABPC4-215ENST00000484555 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
PABPC4-215ENST00000484555 NACADO15069 1562 aa27.18■■□□□ 1.94
PABPC4-215ENST00000484555 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
PABPC4-215ENST00000484555 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
PABPC4-215ENST00000484555 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
PABPC4-215ENST00000484555 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
PABPC4-215ENST00000484555 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
PABPC4-215ENST00000484555 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
PABPC4-215ENST00000484555 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
PABPC4-215ENST00000484555 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
PABPC4-215ENST00000484555 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
PABPC4-215ENST00000484555 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
PABPC4-215ENST00000484555 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
PABPC4-215ENST00000484555 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
PABPC4-215ENST00000484555 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
PABPC4-215ENST00000484555 CUX2O14529 1486 aa25.12■■□□□ 1.61
PABPC4-215ENST00000484555 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
PABPC4-215ENST00000484555 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
PABPC4-215ENST00000484555 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
PABPC4-215ENST00000484555 HMGXB3Q12766 1538 aa24.87■■□□□ 1.57
PABPC4-215ENST00000484555 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
PABPC4-215ENST00000484555 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
PABPC4-215ENST00000484555 NESP48681 1621 aa24.74■■□□□ 1.55
PABPC4-215ENST00000484555 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
PABPC4-215ENST00000484555 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
PABPC4-215ENST00000484555 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
PABPC4-215ENST00000484555 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
PABPC4-215ENST00000484555 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
PABPC4-215ENST00000484555 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
PABPC4-215ENST00000484555 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
PABPC4-215ENST00000484555 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
PABPC4-215ENST00000484555 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
PABPC4-215ENST00000484555 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
PABPC4-215ENST00000484555 WDR62O43379 1518 aa24.19■■□□□ 1.46
PABPC4-215ENST00000484555 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
PABPC4-215ENST00000484555 WIZO95785 1651 aa24.11■■□□□ 1.45
PABPC4-215ENST00000484555 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
PABPC4-215ENST00000484555 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
PABPC4-215ENST00000484555 CFTRP13569 1480 aa23.97■■□□□ 1.43
PABPC4-215ENST00000484555 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
PABPC4-215ENST00000484555 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
PABPC4-215ENST00000484555 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
PABPC4-215ENST00000484555 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
PABPC4-215ENST00000484555 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
PABPC4-215ENST00000484555 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
PABPC4-215ENST00000484555 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
PABPC4-215ENST00000484555 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
PABPC4-215ENST00000484555 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
PABPC4-215ENST00000484555 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
PABPC4-215ENST00000484555 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
PABPC4-215ENST00000484555 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
PABPC4-215ENST00000484555 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
PABPC4-215ENST00000484555 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
PABPC4-215ENST00000484555 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
PABPC4-215ENST00000484555 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
PABPC4-215ENST00000484555 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
PABPC4-215ENST00000484555 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
PABPC4-215ENST00000484555 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.327e-8■■■■■ 41.7
PABPC4-215ENST00000484555 CHD1O14646 1710 aa23.29■■□□□ 1.32
PABPC4-215ENST00000484555 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
PABPC4-215ENST00000484555 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
PABPC4-215ENST00000484555 FBLN2P98095 1184 aa23.2■■□□□ 1.3
PABPC4-215ENST00000484555 TRHP20396 242 aaPredicted RBP23.15■■□□□ 1.3
PABPC4-215ENST00000484555 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
PABPC4-215ENST00000484555 SOGA1O94964 1423 aa23.15■■□□□ 1.3
PABPC4-215ENST00000484555 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
PABPC4-215ENST00000484555 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
PABPC4-215ENST00000484555 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
PABPC4-215ENST00000484555 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
PABPC4-215ENST00000484555 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
PABPC4-215ENST00000484555 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
PABPC4-215ENST00000484555 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
PABPC4-215ENST00000484555 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
PABPC4-215ENST00000484555 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
PABPC4-215ENST00000484555 CUX1P39880 1505 aa22.98■■□□□ 1.27
PABPC4-215ENST00000484555 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
PABPC4-215ENST00000484555 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
PABPC4-215ENST00000484555 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
PABPC4-215ENST00000484555 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
PABPC4-215ENST00000484555 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
PABPC4-215ENST00000484555 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
PABPC4-215ENST00000484555 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
PABPC4-215ENST00000484555 NUP160Q12769 1436 aa22.65■■□□□ 1.22
PABPC4-215ENST00000484555 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
PABPC4-215ENST00000484555 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
PABPC4-215ENST00000484555 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
PABPC4-215ENST00000484555 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
PABPC4-215ENST00000484555 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
PABPC4-215ENST00000484555 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
PABPC4-215ENST00000484555 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
PABPC4-215ENST00000484555 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
PABPC4-215ENST00000484555 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
PABPC4-215ENST00000484555 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
PABPC4-215ENST00000484555 KIF13AQ9H1H9 1805 aa22.43■■□□□ 1.18
PABPC4-215ENST00000484555 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
PABPC4-215ENST00000484555 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms