Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPK1BO75841 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPK1BO75841 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.79■□□□□ 0.92
UPK1BO75841 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPK1BO75841 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
UPK1BO75841 AC233723.2-201ENST00000623798 2106 ntBASIC20.79■□□□□ 0.92
UPK1BO75841 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UPK1BO75841 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPK1BO75841 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
UPK1BO75841 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK1BO75841 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK1BO75841 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPK1BO75841 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.77■□□□□ 0.92
UPK1BO75841 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPK1BO75841 AC004812.2-201ENST00000611079 2094 ntBASIC20.77■□□□□ 0.92
UPK1BO75841 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UPK1BO75841 C1orf229-201ENST00000623686 2258 ntBASIC20.76■□□□□ 0.91
UPK1BO75841 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.76■□□□□ 0.91
UPK1BO75841 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK1BO75841 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK1BO75841 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPK1BO75841 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
UPK1BO75841 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK1BO75841 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
UPK1BO75841 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK1BO75841 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.75■□□□□ 0.91
UPK1BO75841 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK1BO75841 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK1BO75841 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK1BO75841 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UPK1BO75841 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.74■□□□□ 0.91
UPK1BO75841 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK1BO75841 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.74■□□□□ 0.91
UPK1BO75841 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPK1BO75841 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
UPK1BO75841 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.73■□□□□ 0.91
UPK1BO75841 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK1BO75841 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
UPK1BO75841 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPK1BO75841 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
UPK1BO75841 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPK1BO75841 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
UPK1BO75841 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.71■□□□□ 0.91
UPK1BO75841 AC137767.1-201ENST00000602918 1920 ntBASIC20.7■□□□□ 0.91
UPK1BO75841 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.7■□□□□ 0.9
UPK1BO75841 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1BO75841 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.7■□□□□ 0.9
UPK1BO75841 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.7■□□□□ 0.9
UPK1BO75841 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1BO75841 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
UPK1BO75841 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1BO75841 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
UPK1BO75841 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1BO75841 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1BO75841 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UPK1BO75841 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK1BO75841 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.68■□□□□ 0.9
UPK1BO75841 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.68■□□□□ 0.9
UPK1BO75841 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1BO75841 SLC25A24-204ENST00000569674 2357 ntBASIC20.67■□□□□ 0.9
UPK1BO75841 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1BO75841 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1BO75841 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.67■□□□□ 0.9
UPK1BO75841 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1BO75841 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UPK1BO75841 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.66■□□□□ 0.9
UPK1BO75841 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1BO75841 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1BO75841 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1BO75841 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1BO75841 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
UPK1BO75841 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.66■□□□□ 0.9
UPK1BO75841 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1BO75841 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1BO75841 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms