Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SPCS2P3-201ENST00000500401 656 ntBASIC22.05■■□□□ 1.12
HCN1O60741 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HCN1O60741 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.05■■□□□ 1.12
HCN1O60741 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
HCN1O60741 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HCN1O60741 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.04■■□□□ 1.12
HCN1O60741 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCN1O60741 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
HCN1O60741 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.03■■□□□ 1.12
HCN1O60741 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.03■■□□□ 1.12
HCN1O60741 AC074183.2-201ENST00000623112 922 ntBASIC22.03■■□□□ 1.12
HCN1O60741 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCN1O60741 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.03■■□□□ 1.12
HCN1O60741 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCN1O60741 ERN1-208ENST00000606895 2068 ntBASIC22.02■■□□□ 1.12
HCN1O60741 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.02■■□□□ 1.12
HCN1O60741 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCN1O60741 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.02■■□□□ 1.12
HCN1O60741 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCN1O60741 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HCN1O60741 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCN1O60741 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCN1O60741 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HCN1O60741 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.01■■□□□ 1.11
HCN1O60741 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HCN1O60741 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCN1O60741 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
HCN1O60741 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HCN1O60741 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
HCN1O60741 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCN1O60741 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HCN1O60741 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22■■□□□ 1.11
HCN1O60741 BHLHE23-202ENST00000612929 1109 ntBASIC22■■□□□ 1.11
HCN1O60741 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22■■□□□ 1.11
HCN1O60741 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCN1O60741 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCN1O60741 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
HCN1O60741 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
HCN1O60741 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCN1O60741 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HCN1O60741 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HCN1O60741 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.98■■□□□ 1.11
HCN1O60741 AC139795.1-202ENST00000500444 432 ntBASIC21.98■■□□□ 1.11
HCN1O60741 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.98■■□□□ 1.11
HCN1O60741 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCN1O60741 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCN1O60741 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCN1O60741 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCN1O60741 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.97■■□□□ 1.11
HCN1O60741 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCN1O60741 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HCN1O60741 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.96■■□□□ 1.11
HCN1O60741 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.96■■□□□ 1.11
HCN1O60741 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCN1O60741 RARRES2P1-201ENST00000474487 481 ntBASIC21.96■■□□□ 1.11
HCN1O60741 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.96■■□□□ 1.11
HCN1O60741 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCN1O60741 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCN1O60741 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCN1O60741 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.95■■□□□ 1.1
HCN1O60741 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
HCN1O60741 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.95■■□□□ 1.1
HCN1O60741 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCN1O60741 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCN1O60741 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HCN1O60741 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCN1O60741 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.94■■□□□ 1.1
HCN1O60741 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.94■■□□□ 1.1
HCN1O60741 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCN1O60741 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.93■■□□□ 1.1
HCN1O60741 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.93■■□□□ 1.1
HCN1O60741 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCN1O60741 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.92■■□□□ 1.1
HCN1O60741 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.92■■□□□ 1.1
HCN1O60741 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCN1O60741 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.92■■□□□ 1.1
HCN1O60741 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCN1O60741 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
HCN1O60741 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCN1O60741 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCN1O60741 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.91■■□□□ 1.1
HCN1O60741 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCN1O60741 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms