Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.65■■□□□ 1.38
H3BM21 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.65■■□□□ 1.38
H3BM21 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.65■■□□□ 1.38
H3BM21 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
H3BM21 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.65■■□□□ 1.38
H3BM21 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
H3BM21 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
H3BM21 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
H3BM21 AC091060.1-201ENST00000623524 1766 ntBASIC23.64■■□□□ 1.37
H3BM21 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H3BM21 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.64■■□□□ 1.37
H3BM21 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
H3BM21 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.63■■□□□ 1.37
H3BM21 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
H3BM21 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.63■■□□□ 1.37
H3BM21 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 ERN1-208ENST00000606895 2068 ntBASIC23.61■■□□□ 1.37
H3BM21 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 Z92544.1-202ENST00000571933 1220 ntBASIC23.6■■□□□ 1.37
H3BM21 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.59■■□□□ 1.37
H3BM21 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
H3BM21 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
H3BM21 AC145676.1-201ENST00000514988 2004 ntBASIC23.59■■□□□ 1.37
H3BM21 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.59■■□□□ 1.37
H3BM21 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
H3BM21 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
H3BM21 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.58■■□□□ 1.37
H3BM21 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
H3BM21 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.58■■□□□ 1.37
H3BM21 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
H3BM21 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.57■■□□□ 1.36
H3BM21 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 AC239859.2-201ENST00000444165 318 ntBASIC23.57■■□□□ 1.36
H3BM21 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.57■■□□□ 1.36
H3BM21 AC131212.1-201ENST00000613771 668 ntBASIC23.57■■□□□ 1.36
H3BM21 AC010501.1-201ENST00000606270 1962 ntBASIC23.57■■□□□ 1.36
H3BM21 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
H3BM21 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.56■■□□□ 1.36
H3BM21 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.56■■□□□ 1.36
H3BM21 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.56■■□□□ 1.36
H3BM21 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 DUSP8P4-201ENST00000399538 1761 ntBASIC23.55■■□□□ 1.36
H3BM21 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.55■■□□□ 1.36
H3BM21 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
H3BM21 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
H3BM21 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.54■■□□□ 1.36
H3BM21 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 BX664725.1-201ENST00000438252 379 ntBASIC23.54■■□□□ 1.36
H3BM21 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
H3BM21 KRT125P-201ENST00000546827 989 ntBASIC23.54■■□□□ 1.36
H3BM21 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 THA1P-201ENST00000590384 1145 ntBASIC23.53■■□□□ 1.36
H3BM21 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
H3BM21 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
H3BM21 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 KRT18P24-201ENST00000344739 1156 ntBASIC23.52■■□□□ 1.36
H3BM21 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.52■■□□□ 1.36
H3BM21 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
H3BM21 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms