Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00959A0A1B0GUT2 LINC01124-201ENST00000409786 2117 ntBASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 AC060814.1-201ENST00000554326 538 ntBASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00959A0A1B0GUT2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 SMPD5-203ENST00000639008 1464 ntBASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00959A0A1B0GUT2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00959A0A1B0GUT2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00959A0A1B0GUT2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00959A0A1B0GUT2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LINC00959A0A1B0GUT2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00959A0A1B0GUT2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.08■□□□□ 0.17
LINC00959A0A1B0GUT2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00959A0A1B0GUT2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 MIR7108-201ENST00000614319 87 ntBASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC00959A0A1B0GUT2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 AC092296.2-201ENST00000589470 999 ntBASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LINC00959A0A1B0GUT2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00959A0A1B0GUT2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00959A0A1B0GUT2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.05■□□□□ 0.16
LINC00959A0A1B0GUT2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms