Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH20Q9HBT6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH20Q9HBT6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 DUSP8P4-201ENST00000399538 1761 ntBASIC20.78■□□□□ 0.92
CDH20Q9HBT6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH20Q9HBT6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 ATP5G2P3-201ENST00000429083 425 ntBASIC20.77■□□□□ 0.92
CDH20Q9HBT6 DUX4L18-201ENST00000553347 1267 ntBASIC20.77■□□□□ 0.92
CDH20Q9HBT6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH20Q9HBT6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH20Q9HBT6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.77■□□□□ 0.91
CDH20Q9HBT6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH20Q9HBT6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH20Q9HBT6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH20Q9HBT6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH20Q9HBT6 AC004987.1-201ENST00000428627 508 ntBASIC20.76■□□□□ 0.91
CDH20Q9HBT6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.76■□□□□ 0.91
CDH20Q9HBT6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH20Q9HBT6 TSPY13P-201ENST00000338964 914 ntBASIC20.75■□□□□ 0.91
CDH20Q9HBT6 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH20Q9HBT6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH20Q9HBT6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.75■□□□□ 0.91
CDH20Q9HBT6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDH20Q9HBT6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH20Q9HBT6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH20Q9HBT6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDH20Q9HBT6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 AC139795.1-202ENST00000500444 432 ntBASIC20.73■□□□□ 0.91
CDH20Q9HBT6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDH20Q9HBT6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH20Q9HBT6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
CDH20Q9HBT6 AC096887.2-201ENST00000623443 1957 ntBASIC20.72■□□□□ 0.91
CDH20Q9HBT6 AL033527.3-201ENST00000566366 1196 ntBASIC20.72■□□□□ 0.91
CDH20Q9HBT6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH20Q9HBT6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH20Q9HBT6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 BHLHE23-202ENST00000612929 1109 ntBASIC20.71■□□□□ 0.91
CDH20Q9HBT6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CDH20Q9HBT6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDH20Q9HBT6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH20Q9HBT6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 RPS2P7-201ENST00000447334 885 ntBASIC20.69■□□□□ 0.9
CDH20Q9HBT6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH20Q9HBT6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH20Q9HBT6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms