Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 DUX4L25-201ENST00000624915 1269 ntBASIC19.58■□□□□ 0.72
TMEM56Q96MV1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TMEM56Q96MV1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM56Q96MV1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM56Q96MV1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM56Q96MV1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TMEM56Q96MV1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM56Q96MV1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TMEM56Q96MV1 AC012676.1-201ENST00000574705 1949 ntBASIC19.57■□□□□ 0.72
TMEM56Q96MV1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM56Q96MV1 LINC00543-201ENST00000567234 1845 ntBASIC19.55■□□□□ 0.72
TMEM56Q96MV1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 AC097639.1-201ENST00000565519 1891 ntBASIC19.55■□□□□ 0.72
TMEM56Q96MV1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM56Q96MV1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 AL359504.2-201ENST00000605506 1601 ntBASIC19.54■□□□□ 0.72
TMEM56Q96MV1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM56Q96MV1 SLC6A10P-202ENST00000431994 2058 ntBASIC19.53■□□□□ 0.72
TMEM56Q96MV1 MIR219A2-201ENST00000608502 1504 ntBASIC19.53■□□□□ 0.72
TMEM56Q96MV1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 AC133561.1-201ENST00000568600 2415 ntBASIC19.53■□□□□ 0.72
TMEM56Q96MV1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM56Q96MV1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 AC148477.6-201ENST00000623746 465 ntBASIC19.52■□□□□ 0.72
TMEM56Q96MV1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM56Q96MV1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM56Q96MV1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM56Q96MV1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 DUX4L11-201ENST00000611504 1267 ntBASIC19.51■□□□□ 0.71
TMEM56Q96MV1 DUX4L12-201ENST00000614593 1267 ntBASIC19.51■□□□□ 0.71
TMEM56Q96MV1 DUX4L14-201ENST00000621227 1267 ntBASIC19.51■□□□□ 0.71
TMEM56Q96MV1 AC141586.4-201ENST00000624558 1573 ntBASIC19.51■□□□□ 0.71
TMEM56Q96MV1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM56Q96MV1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM56Q96MV1 AL359258.2-201ENST00000564063 1566 ntBASIC19.49■□□□□ 0.71
TMEM56Q96MV1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM56Q96MV1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56Q96MV1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56Q96MV1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms