Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COX4I2Q96KJ9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 AC022413.1-201ENST00000624602 984 ntBASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COX4I2Q96KJ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 AL024507.2-201ENST00000606070 2574 ntBASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COX4I2Q96KJ9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COX4I2Q96KJ9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
COX4I2Q96KJ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COX4I2Q96KJ9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
COX4I2Q96KJ9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
COX4I2Q96KJ9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COX4I2Q96KJ9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COX4I2Q96KJ9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.76■■□□□ 1.07
COX4I2Q96KJ9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COX4I2Q96KJ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COX4I2Q96KJ9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 AC018358.1-201ENST00000631079 1402 ntBASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COX4I2Q96KJ9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 LINC00273-201ENST00000539813 1452 ntBASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COX4I2Q96KJ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 AC008813.1-201ENST00000536597 885 ntBASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 AL033527.3-201ENST00000566366 1196 ntBASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COX4I2Q96KJ9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COX4I2Q96KJ9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COX4I2Q96KJ9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms