Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 LONRF2P2-201ENST00000439212 571 ntBASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 BHLHE23-202ENST00000612929 1109 ntBASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC3Q96DC8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 AC010980.1-201ENST00000587192 1142 ntBASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 AC019171.1-201ENST00000601251 1056 ntBASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 PVT1_1.1-201ENST00000615125 194 ntBASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC3Q96DC8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC3Q96DC8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC3Q96DC8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.03■■□□□ 1.44
ECHDC3Q96DC8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC3Q96DC8 AC145676.1-201ENST00000514988 2004 ntBASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.02■■□□□ 1.44
ECHDC3Q96DC8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ECHDC3Q96DC8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC3Q96DC8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.01■■□□□ 1.43
ECHDC3Q96DC8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC3Q96DC8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
ECHDC3Q96DC8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24■■□□□ 1.43
ECHDC3Q96DC8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24■■□□□ 1.43
ECHDC3Q96DC8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24■■□□□ 1.43
ECHDC3Q96DC8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24■■□□□ 1.43
ECHDC3Q96DC8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24■■□□□ 1.43
ECHDC3Q96DC8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ECHDC3Q96DC8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ECHDC3Q96DC8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
ECHDC3Q96DC8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.97■■□□□ 1.43
ECHDC3Q96DC8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 AC097639.1-201ENST00000565519 1891 ntBASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ECHDC3Q96DC8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC3Q96DC8 AC103834.1-201ENST00000520383 144 ntBASIC23.95■■□□□ 1.42
ECHDC3Q96DC8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC3Q96DC8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
ECHDC3Q96DC8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC3Q96DC8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC3Q96DC8 MIR4508-201ENST00000584178 70 ntBASIC23.94■■□□□ 1.42
ECHDC3Q96DC8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC3Q96DC8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.92■■□□□ 1.42
ECHDC3Q96DC8 RARRES2P1-201ENST00000474487 481 ntBASIC23.92■■□□□ 1.42
ECHDC3Q96DC8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms