Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF183Q96D59 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF183Q96D59 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF183Q96D59 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF183Q96D59 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RNF183Q96D59 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF183Q96D59 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF183Q96D59 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF183Q96D59 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF183Q96D59 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 YBX1P4-201ENST00000392794 808 ntBASIC17.54■□□□□ 0.4
RNF183Q96D59 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF183Q96D59 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF183Q96D59 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF183Q96D59 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF183Q96D59 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF183Q96D59 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF183Q96D59 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF183Q96D59 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF183Q96D59 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF183Q96D59 KRT8P33-201ENST00000508125 1423 ntBASIC17.53■□□□□ 0.4
RNF183Q96D59 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF183Q96D59 AC019171.1-201ENST00000601251 1056 ntBASIC17.52■□□□□ 0.4
RNF183Q96D59 PVT1_1.1-201ENST00000615125 194 ntBASIC17.52■□□□□ 0.4
RNF183Q96D59 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF183Q96D59 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF183Q96D59 MIR4508-201ENST00000584178 70 ntBASIC17.51■□□□□ 0.39
RNF183Q96D59 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF183Q96D59 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF183Q96D59 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF183Q96D59 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF183Q96D59 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF183Q96D59 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF183Q96D59 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF183Q96D59 AC103834.1-201ENST00000520383 144 ntBASIC17.49■□□□□ 0.39
RNF183Q96D59 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNF183Q96D59 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF183Q96D59 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF183Q96D59 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF183Q96D59 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF183Q96D59 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF183Q96D59 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF183Q96D59 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF183Q96D59 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF183Q96D59 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF183Q96D59 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RNF183Q96D59 LONRF2P2-201ENST00000439212 571 ntBASIC17.47■□□□□ 0.39
RNF183Q96D59 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF183Q96D59 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF183Q96D59 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RNF183Q96D59 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF183Q96D59 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF183Q96D59 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF183Q96D59 AL451085.2-201ENST00000605085 799 ntBASIC17.46■□□□□ 0.39
RNF183Q96D59 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF183Q96D59 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF183Q96D59 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
RNF183Q96D59 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNF183Q96D59 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF183Q96D59 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF183Q96D59 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF183Q96D59 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF183Q96D59 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms