Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM1Q86UE6 LINC00543-201ENST00000567234 1845 ntBASIC20.67■□□□□ 0.9
LRRTM1Q86UE6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM1Q86UE6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM1Q86UE6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM1Q86UE6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
LRRTM1Q86UE6 AC133561.1-201ENST00000568600 2415 ntBASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 HLA-V-202ENST00000446817 847 ntBASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRTM1Q86UE6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRTM1Q86UE6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRTM1Q86UE6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
LRRTM1Q86UE6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.64■□□□□ 0.9
LRRTM1Q86UE6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM1Q86UE6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM1Q86UE6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRTM1Q86UE6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
LRRTM1Q86UE6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRTM1Q86UE6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM1Q86UE6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM1Q86UE6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM1Q86UE6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRTM1Q86UE6 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 DUX4L11-201ENST00000611504 1267 ntBASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 DUX4L12-201ENST00000614593 1267 ntBASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 DUX4L14-201ENST00000621227 1267 ntBASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms