Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.5■■□□□ 1.67
VARS2Q5ST30 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
VARS2Q5ST30 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
VARS2Q5ST30 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
VARS2Q5ST30 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VARS2Q5ST30 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VARS2Q5ST30 GUSBP5-201ENST00000418136 578 ntBASIC25.49■■□□□ 1.67
VARS2Q5ST30 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
VARS2Q5ST30 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
VARS2Q5ST30 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VARS2Q5ST30 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VARS2Q5ST30 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
VARS2Q5ST30 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
VARS2Q5ST30 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.47■■□□□ 1.67
VARS2Q5ST30 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VARS2Q5ST30 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
VARS2Q5ST30 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
VARS2Q5ST30 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.46■■□□□ 1.67
VARS2Q5ST30 AC131212.1-201ENST00000613771 668 ntBASIC25.46■■□□□ 1.67
VARS2Q5ST30 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.45■■□□□ 1.67
VARS2Q5ST30 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.45■■□□□ 1.67
VARS2Q5ST30 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
VARS2Q5ST30 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.45■■□□□ 1.66
VARS2Q5ST30 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 AC239859.2-201ENST00000444165 318 ntBASIC25.44■■□□□ 1.66
VARS2Q5ST30 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.44■■□□□ 1.66
VARS2Q5ST30 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
VARS2Q5ST30 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.44■■□□□ 1.66
VARS2Q5ST30 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
VARS2Q5ST30 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.43■■□□□ 1.66
VARS2Q5ST30 KRT18P24-201ENST00000344739 1156 ntBASIC25.43■■□□□ 1.66
VARS2Q5ST30 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.43■■□□□ 1.66
VARS2Q5ST30 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.43■■□□□ 1.66
VARS2Q5ST30 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VARS2Q5ST30 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
VARS2Q5ST30 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
VARS2Q5ST30 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.42■■□□□ 1.66
VARS2Q5ST30 Z92544.1-202ENST00000571933 1220 ntBASIC25.42■■□□□ 1.66
VARS2Q5ST30 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.42■■□□□ 1.66
VARS2Q5ST30 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
VARS2Q5ST30 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
VARS2Q5ST30 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
VARS2Q5ST30 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.41■■□□□ 1.66
VARS2Q5ST30 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
VARS2Q5ST30 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VARS2Q5ST30 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
VARS2Q5ST30 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
VARS2Q5ST30 THA1P-201ENST00000590384 1145 ntBASIC25.4■■□□□ 1.66
VARS2Q5ST30 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.4■■□□□ 1.66
VARS2Q5ST30 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VARS2Q5ST30 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VARS2Q5ST30 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.39■■□□□ 1.66
VARS2Q5ST30 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.39■■□□□ 1.66
VARS2Q5ST30 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
VARS2Q5ST30 AC120024.1-201ENST00000562672 995 ntBASIC25.39■■□□□ 1.66
VARS2Q5ST30 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
VARS2Q5ST30 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VARS2Q5ST30 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
VARS2Q5ST30 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
VARS2Q5ST30 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.38■■□□□ 1.65
VARS2Q5ST30 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.38■■□□□ 1.65
VARS2Q5ST30 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VARS2Q5ST30 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VARS2Q5ST30 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
VARS2Q5ST30 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.37■■□□□ 1.65
VARS2Q5ST30 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
VARS2Q5ST30 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VARS2Q5ST30 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
VARS2Q5ST30 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.37■■□□□ 1.65
VARS2Q5ST30 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VARS2Q5ST30 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VARS2Q5ST30 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.37■■□□□ 1.65
VARS2Q5ST30 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VARS2Q5ST30 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
VARS2Q5ST30 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
VARS2Q5ST30 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VARS2Q5ST30 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
VARS2Q5ST30 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
VARS2Q5ST30 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.36■■□□□ 1.65
VARS2Q5ST30 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VARS2Q5ST30 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VARS2Q5ST30 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VARS2Q5ST30 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
VARS2Q5ST30 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.34■■□□□ 1.65
VARS2Q5ST30 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
VARS2Q5ST30 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VARS2Q5ST30 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
VARS2Q5ST30 BX664725.1-201ENST00000438252 379 ntBASIC25.34■■□□□ 1.65
VARS2Q5ST30 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
VARS2Q5ST30 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VARS2Q5ST30 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms