Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21■□□□□ 0.95
LSM6P62312 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LSM6P62312 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM6P62312 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
LSM6P62312 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM6P62312 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM6P62312 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM6P62312 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM6P62312 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.98■□□□□ 0.95
LSM6P62312 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM6P62312 AC142381.3-201ENST00000568208 1670 ntBASIC20.98■□□□□ 0.95
LSM6P62312 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM6P62312 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSM6P62312 KRT18P10-201ENST00000388836 1287 ntBASIC20.97■□□□□ 0.95
LSM6P62312 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM6P62312 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM6P62312 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM6P62312 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LSM6P62312 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM6P62312 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM6P62312 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
LSM6P62312 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.95■□□□□ 0.95
LSM6P62312 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.95■□□□□ 0.94
LSM6P62312 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 AC022211.4-201ENST00000625094 2161 ntBASIC20.95■□□□□ 0.94
LSM6P62312 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.95■□□□□ 0.94
LSM6P62312 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM6P62312 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM6P62312 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM6P62312 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM6P62312 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM6P62312 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.94■□□□□ 0.94
LSM6P62312 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.93■□□□□ 0.94
LSM6P62312 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LSM6P62312 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM6P62312 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM6P62312 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM6P62312 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.92■□□□□ 0.94
LSM6P62312 AC133552.2-201ENST00000619106 1032 ntBASIC20.92■□□□□ 0.94
LSM6P62312 AC009831.1-201ENST00000580420 1582 ntBASIC20.92■□□□□ 0.94
LSM6P62312 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM6P62312 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LSM6P62312 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.92■□□□□ 0.94
LSM6P62312 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM6P62312 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LSM6P62312 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM6P62312 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LSM6P62312 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM6P62312 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.91■□□□□ 0.94
LSM6P62312 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM6P62312 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM6P62312 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM6P62312 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LSM6P62312 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM6P62312 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM6P62312 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.89■□□□□ 0.94
LSM6P62312 SLC6A10P-202ENST00000431994 2058 ntBASIC20.89■□□□□ 0.93
LSM6P62312 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM6P62312 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM6P62312 HSD17B1P1-201ENST00000590052 955 ntBASIC20.89■□□□□ 0.93
LSM6P62312 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM6P62312 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM6P62312 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM6P62312 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
LSM6P62312 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM6P62312 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LSM6P62312 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LSM6P62312 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
LSM6P62312 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.88■□□□□ 0.93
LSM6P62312 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.88■□□□□ 0.93
LSM6P62312 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM6P62312 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LSM6P62312 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM6P62312 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM6P62312 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSM6P62312 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
LSM6P62312 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSM6P62312 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms