Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.05■■■□□ 2.56
KCNQ4P56696 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ4P56696 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ4P56696 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
KCNQ4P56696 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ4P56696 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
KCNQ4P56696 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.04■■■□□ 2.56
KCNQ4P56696 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNQ4P56696 AC092666.2-201ENST00000613287 246 ntBASIC31.04■■■□□ 2.56
KCNQ4P56696 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNQ4P56696 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.04■■■□□ 2.56
KCNQ4P56696 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.04■■■□□ 2.56
KCNQ4P56696 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KCNQ4P56696 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KCNQ4P56696 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KCNQ4P56696 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.03■■■□□ 2.56
KCNQ4P56696 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
KCNQ4P56696 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
KCNQ4P56696 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.02■■■□□ 2.56
KCNQ4P56696 ZNRF2P3-201ENST00000424200 374 ntBASIC31.02■■■□□ 2.56
KCNQ4P56696 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.02■■■□□ 2.56
KCNQ4P56696 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
KCNQ4P56696 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
KCNQ4P56696 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.01■■■□□ 2.55
KCNQ4P56696 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
KCNQ4P56696 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31■■■□□ 2.55
KCNQ4P56696 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
KCNQ4P56696 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31■■■□□ 2.55
KCNQ4P56696 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31■■■□□ 2.55
KCNQ4P56696 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
KCNQ4P56696 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.99■■■□□ 2.55
KCNQ4P56696 MIR6724-1-201ENST00000616420 92 ntBASIC30.99■■■□□ 2.55
KCNQ4P56696 MIR6724-2-201ENST00000616483 92 ntBASIC30.99■■■□□ 2.55
KCNQ4P56696 MIR6724-4-201ENST00000617390 92 ntBASIC30.99■■■□□ 2.55
KCNQ4P56696 MIR6724-3-201ENST00000622482 92 ntBASIC30.99■■■□□ 2.55
KCNQ4P56696 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
KCNQ4P56696 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
KCNQ4P56696 KRT18P10-201ENST00000388836 1287 ntBASIC30.98■■■□□ 2.55
KCNQ4P56696 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
KCNQ4P56696 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
KCNQ4P56696 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KCNQ4P56696 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.96■■■□□ 2.55
KCNQ4P56696 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.96■■■□□ 2.55
KCNQ4P56696 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.96■■■□□ 2.55
KCNQ4P56696 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.96■■■□□ 2.55
KCNQ4P56696 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.55
KCNQ4P56696 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
KCNQ4P56696 MTDHP2-201ENST00000601468 714 ntBASIC30.95■■■□□ 2.55
KCNQ4P56696 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
KCNQ4P56696 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
KCNQ4P56696 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
KCNQ4P56696 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.94■■■□□ 2.54
KCNQ4P56696 AL512631.2-201ENST00000604634 923 ntBASIC30.94■■■□□ 2.54
KCNQ4P56696 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.94■■■□□ 2.54
KCNQ4P56696 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.94■■■□□ 2.54
KCNQ4P56696 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
KCNQ4P56696 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
KCNQ4P56696 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
KCNQ4P56696 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
KCNQ4P56696 RARRES2P6-201ENST00000567333 442 ntBASIC30.93■■■□□ 2.54
KCNQ4P56696 AL356740.2-201ENST00000601559 647 ntBASIC30.93■■■□□ 2.54
KCNQ4P56696 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
KCNQ4P56696 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.92■■■□□ 2.54
KCNQ4P56696 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.92■■■□□ 2.54
KCNQ4P56696 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
KCNQ4P56696 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.92■■■□□ 2.54
KCNQ4P56696 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.92■■■□□ 2.54
KCNQ4P56696 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.92■■■□□ 2.54
KCNQ4P56696 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KCNQ4P56696 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.91■■■□□ 2.54
KCNQ4P56696 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.91■■■□□ 2.54
KCNQ4P56696 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
KCNQ4P56696 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KCNQ4P56696 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.9■■■□□ 2.54
KCNQ4P56696 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.9■■■□□ 2.54
KCNQ4P56696 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KCNQ4P56696 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KCNQ4P56696 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
KCNQ4P56696 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.88■■■□□ 2.53
KCNQ4P56696 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.88■■■□□ 2.53
KCNQ4P56696 AC133561.4-201ENST00000566112 224 ntBASIC30.87■■■□□ 2.53
KCNQ4P56696 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.87■■■□□ 2.53
KCNQ4P56696 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
KCNQ4P56696 BX255925.1-201ENST00000566954 1854 ntBASIC30.87■■■□□ 2.53
KCNQ4P56696 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.86■■■□□ 2.53
KCNQ4P56696 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
KCNQ4P56696 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.85■■■□□ 2.53
KCNQ4P56696 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
KCNQ4P56696 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
KCNQ4P56696 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
KCNQ4P56696 AC026271.2-201ENST00000428091 497 ntBASIC30.85■■■□□ 2.53
KCNQ4P56696 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.85■■■□□ 2.53
KCNQ4P56696 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
KCNQ4P56696 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
KCNQ4P56696 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
KCNQ4P56696 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.84■■■□□ 2.53
KCNQ4P56696 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
KCNQ4P56696 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.83■■■□□ 2.53
KCNQ4P56696 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
KCNQ4P56696 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms