Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOC4P55056 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOC4P55056 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.52■□□□□ 0.4
APOC4P55056 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOC4P55056 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOC4P55056 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.52■□□□□ 0.4
APOC4P55056 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOC4P55056 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.52■□□□□ 0.39
APOC4P55056 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APOC4P55056 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC4P55056 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOC4P55056 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.51■□□□□ 0.39
APOC4P55056 AL451085.2-201ENST00000605085 799 ntBASIC17.51■□□□□ 0.39
APOC4P55056 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APOC4P55056 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOC4P55056 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
APOC4P55056 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
APOC4P55056 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.5■□□□□ 0.39
APOC4P55056 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC4P55056 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOC4P55056 AL035685.1-201ENST00000636663 812 ntBASIC17.5■□□□□ 0.39
APOC4P55056 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOC4P55056 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOC4P55056 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOC4P55056 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC4P55056 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
APOC4P55056 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC4P55056 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
APOC4P55056 AC103724.3-201ENST00000564481 992 ntBASIC17.49■□□□□ 0.39
APOC4P55056 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
APOC4P55056 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC4P55056 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOC4P55056 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.49■□□□□ 0.39
APOC4P55056 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC4P55056 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC4P55056 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
APOC4P55056 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.48■□□□□ 0.39
APOC4P55056 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
APOC4P55056 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOC4P55056 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
APOC4P55056 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
APOC4P55056 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APOC4P55056 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
APOC4P55056 AL592295.1-201ENST00000400984 884 ntBASIC17.47■□□□□ 0.39
APOC4P55056 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.47■□□□□ 0.39
APOC4P55056 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.47■□□□□ 0.39
APOC4P55056 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APOC4P55056 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.46■□□□□ 0.39
APOC4P55056 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOC4P55056 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.46■□□□□ 0.39
APOC4P55056 AC009299.2-201ENST00000482477 511 ntBASIC17.46■□□□□ 0.39
APOC4P55056 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.46■□□□□ 0.39
APOC4P55056 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.46■□□□□ 0.39
APOC4P55056 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APOC4P55056 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APOC4P55056 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
APOC4P55056 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.46■□□□□ 0.39
APOC4P55056 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
APOC4P55056 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
APOC4P55056 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.45■□□□□ 0.38
APOC4P55056 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APOC4P55056 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APOC4P55056 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 THA1P-201ENST00000590384 1145 ntBASIC17.44■□□□□ 0.38
APOC4P55056 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.44■□□□□ 0.38
APOC4P55056 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
APOC4P55056 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.43■□□□□ 0.38
APOC4P55056 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC4P55056 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC4P55056 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC4P55056 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC4P55056 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC4P55056 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC4P55056 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC4P55056 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC4P55056 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC4P55056 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
APOC4P55056 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
APOC4P55056 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.42■□□□□ 0.38
APOC4P55056 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.42■□□□□ 0.38
APOC4P55056 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC4P55056 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.42■□□□□ 0.38
APOC4P55056 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.42■□□□□ 0.38
APOC4P55056 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
APOC4P55056 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
APOC4P55056 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOC4P55056 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.41■□□□□ 0.38
APOC4P55056 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
APOC4P55056 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms