Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V0CP27449 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATP6V0CP27449 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V0CP27449 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V0CP27449 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V0CP27449 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V0CP27449 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V0CP27449 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP6V0CP27449 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6V0CP27449 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
ATP6V0CP27449 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V0CP27449 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP6V0CP27449 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.04■□□□□ 0.64
ATP6V0CP27449 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ATP6V0CP27449 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 AC141586.4-201ENST00000624558 1573 ntBASIC19.04■□□□□ 0.64
ATP6V0CP27449 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATP6V0CP27449 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP6V0CP27449 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ATP6V0CP27449 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP6V0CP27449 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP6V0CP27449 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0CP27449 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0CP27449 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0CP27449 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0CP27449 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0CP27449 MIR6090-201ENST00000622481 60 ntBASIC19.02■□□□□ 0.64
ATP6V0CP27449 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0CP27449 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP6V0CP27449 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0CP27449 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0CP27449 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0CP27449 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0CP27449 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0CP27449 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0CP27449 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0CP27449 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP6V0CP27449 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0CP27449 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATP6V0CP27449 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0CP27449 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ATP6V0CP27449 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATP6V0CP27449 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP6V0CP27449 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19■□□□□ 0.63
ATP6V0CP27449 CHML-205ENST00000638160 705 ntTSL 3 BASIC19■□□□□ 0.63
ATP6V0CP27449 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19■□□□□ 0.63
ATP6V0CP27449 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
ATP6V0CP27449 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0CP27449 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP6V0CP27449 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP6V0CP27449 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP6V0CP27449 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP6V0CP27449 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATP6V0CP27449 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP6V0CP27449 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP6V0CP27449 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATP6V0CP27449 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ATP6V0CP27449 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP6V0CP27449 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATP6V0CP27449 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP6V0CP27449 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP6V0CP27449 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP6V0CP27449 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATP6V0CP27449 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATP6V0CP27449 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP6V0CP27449 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms