Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NEBP20929 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC9.47□□□□□ -0.89
NEBP20929 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC9.47□□□□□ -0.89
NEBP20929 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC9.46□□□□□ -0.89
NEBP20929 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
NEBP20929 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
NEBP20929 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NEBP20929 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
NEBP20929 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
NEBP20929 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.46□□□□□ -0.9
NEBP20929 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NEBP20929 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NEBP20929 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NEBP20929 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC9.46□□□□□ -0.9
NEBP20929 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC9.46□□□□□ -0.9
NEBP20929 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NEBP20929 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
NEBP20929 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC9.46□□□□□ -0.9
NEBP20929 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
NEBP20929 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NEBP20929 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NEBP20929 AC120024.1-201ENST00000562672 995 ntBASIC9.45□□□□□ -0.9
NEBP20929 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC9.45□□□□□ -0.9
NEBP20929 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC9.45□□□□□ -0.9
NEBP20929 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NEBP20929 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NEBP20929 CDCA4P2-201ENST00000441182 718 ntBASIC9.45□□□□□ -0.9
NEBP20929 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NEBP20929 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NEBP20929 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 JTB-203ENST00000368589 1216 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 MIR3960-201ENST00000583311 91 ntBASIC9.44□□□□□ -0.9
NEBP20929 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
NEBP20929 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NEBP20929 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.44□□□□□ -0.9
NEBP20929 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC9.44□□□□□ -0.9
NEBP20929 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NEBP20929 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC9.43□□□□□ -0.9
NEBP20929 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NEBP20929 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NEBP20929 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC9.43□□□□□ -0.9
NEBP20929 ME3-201ENST00000323418 1068 ntTSL 5 BASIC9.43□□□□□ -0.9
NEBP20929 FAM210CP-201ENST00000445714 574 ntBASIC9.43□□□□□ -0.9
NEBP20929 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NEBP20929 WHAMMP2-203ENST00000563942 1603 ntBASIC9.43□□□□□ -0.9
NEBP20929 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NEBP20929 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC9.42□□□□□ -0.9
NEBP20929 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC9.42□□□□□ -0.9
NEBP20929 MIR4651-201ENST00000582622 73 ntBASIC9.42□□□□□ -0.9
NEBP20929 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
NEBP20929 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC9.42□□□□□ -0.9
NEBP20929 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
NEBP20929 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC9.42□□□□□ -0.9
NEBP20929 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC9.42□□□□□ -0.9
NEBP20929 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC9.42□□□□□ -0.9
NEBP20929 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC9.42□□□□□ -0.9
NEBP20929 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NEBP20929 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC9.41□□□□□ -0.9
NEBP20929 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC9.41□□□□□ -0.9
NEBP20929 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC9.41□□□□□ -0.9
NEBP20929 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
NEBP20929 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
NEBP20929 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NEBP20929 AL109923.1-201ENST00000618799 583 ntBASIC9.41□□□□□ -0.9
NEBP20929 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC9.4□□□□□ -0.9
NEBP20929 AL596275.1-201ENST00000423464 877 ntBASIC9.4□□□□□ -0.9
NEBP20929 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NEBP20929 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.4□□□□□ -0.9
NEBP20929 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC9.4□□□□□ -0.9
NEBP20929 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC9.4□□□□□ -0.9
NEBP20929 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC9.4□□□□□ -0.9
NEBP20929 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC9.4□□□□□ -0.9
NEBP20929 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
NEBP20929 AK3-203ENST00000447596 705 ntTSL 2 BASIC9.4□□□□□ -0.91
NEBP20929 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NEBP20929 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.91
NEBP20929 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms