Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC087393.1-201ENST00000582896 145 ntBASIC31.78■■■□□ 2.68
NEFMP07197 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.78■■■□□ 2.68
NEFMP07197 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEFMP07197 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEFMP07197 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.77■■■□□ 2.68
NEFMP07197 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEFMP07197 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEFMP07197 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NEFMP07197 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.76■■■□□ 2.67
NEFMP07197 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
NEFMP07197 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.75■■■□□ 2.67
NEFMP07197 AC010980.1-201ENST00000587192 1142 ntBASIC31.75■■■□□ 2.67
NEFMP07197 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
NEFMP07197 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NEFMP07197 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.74■■■□□ 2.67
NEFMP07197 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NEFMP07197 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NEFMP07197 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NEFMP07197 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NEFMP07197 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.72■■■□□ 2.67
NEFMP07197 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
NEFMP07197 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.72■■■□□ 2.67
NEFMP07197 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NEFMP07197 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NEFMP07197 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.71■■■□□ 2.67
NEFMP07197 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.71■■■□□ 2.67
NEFMP07197 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.71■■■□□ 2.67
NEFMP07197 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.7■■■□□ 2.67
NEFMP07197 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.7■■■□□ 2.66
NEFMP07197 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
NEFMP07197 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.69■■■□□ 2.66
NEFMP07197 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NEFMP07197 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.69■■■□□ 2.66
NEFMP07197 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NEFMP07197 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
NEFMP07197 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NEFMP07197 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.68■■■□□ 2.66
NEFMP07197 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.68■■■□□ 2.66
NEFMP07197 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NEFMP07197 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
NEFMP07197 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NEFMP07197 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NEFMP07197 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NEFMP07197 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NEFMP07197 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
NEFMP07197 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEFMP07197 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
NEFMP07197 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEFMP07197 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.66■■■□□ 2.66
NEFMP07197 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NEFMP07197 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NEFMP07197 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.65■■■□□ 2.66
NEFMP07197 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NEFMP07197 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.65■■■□□ 2.66
NEFMP07197 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NEFMP07197 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NEFMP07197 AC092803.2-201ENST00000564287 1899 ntBASIC31.65■■■□□ 2.66
NEFMP07197 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.65■■■□□ 2.66
NEFMP07197 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
NEFMP07197 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NEFMP07197 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.64■■■□□ 2.66
NEFMP07197 AC019171.1-201ENST00000601251 1056 ntBASIC31.64■■■□□ 2.66
NEFMP07197 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NEFMP07197 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NEFMP07197 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.63■■■□□ 2.65
NEFMP07197 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NEFMP07197 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.63■■■□□ 2.65
NEFMP07197 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.63■■■□□ 2.65
NEFMP07197 YBX1P4-201ENST00000392794 808 ntBASIC31.62■■■□□ 2.65
NEFMP07197 LONRF2P2-201ENST00000439212 571 ntBASIC31.62■■■□□ 2.65
NEFMP07197 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
NEFMP07197 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.62■■■□□ 2.65
NEFMP07197 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NEFMP07197 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.62■■■□□ 2.65
NEFMP07197 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NEFMP07197 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
NEFMP07197 ERN1-208ENST00000606895 2068 ntBASIC31.61■■■□□ 2.65
NEFMP07197 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NEFMP07197 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NEFMP07197 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.61■■■□□ 2.65
NEFMP07197 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.61■■■□□ 2.65
NEFMP07197 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NEFMP07197 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.61■■■□□ 2.65
NEFMP07197 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.61■■■□□ 2.65
NEFMP07197 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NEFMP07197 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NEFMP07197 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NEFMP07197 RARRES2P1-201ENST00000474487 481 ntBASIC31.6■■■□□ 2.65
NEFMP07197 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
NEFMP07197 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.6■■■□□ 2.65
NEFMP07197 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
NEFMP07197 KRT8P33-201ENST00000508125 1423 ntBASIC31.59■■■□□ 2.65
NEFMP07197 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NEFMP07197 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NEFMP07197 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms