Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRAP04437 AL359504.2-201ENST00000605506 1601 ntBASIC18.1■□□□□ 0.49
TCRAP04437 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TCRAP04437 MIR219A2-201ENST00000608502 1504 ntBASIC18.1■□□□□ 0.49
TCRAP04437 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRAP04437 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRAP04437 AC008813.1-201ENST00000536597 885 ntBASIC18.1■□□□□ 0.49
TCRAP04437 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRAP04437 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TCRAP04437 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRAP04437 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRAP04437 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRAP04437 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRAP04437 LINC00543-201ENST00000567234 1845 ntBASIC18.09■□□□□ 0.49
TCRAP04437 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRAP04437 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TCRAP04437 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.08■□□□□ 0.49
TCRAP04437 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRAP04437 SLC6A10P-202ENST00000431994 2058 ntBASIC18.08■□□□□ 0.49
TCRAP04437 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TCRAP04437 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRAP04437 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRAP04437 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRAP04437 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRAP04437 AL359258.2-201ENST00000564063 1566 ntBASIC18.08■□□□□ 0.48
TCRAP04437 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRAP04437 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRAP04437 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRAP04437 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRAP04437 AC148477.6-201ENST00000623746 465 ntBASIC18.07■□□□□ 0.48
TCRAP04437 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRAP04437 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRAP04437 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRAP04437 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRAP04437 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TCRAP04437 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRAP04437 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRAP04437 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TCRAP04437 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TCRAP04437 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRAP04437 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRAP04437 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRAP04437 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRAP04437 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TCRAP04437 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRAP04437 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRAP04437 AC141586.4-201ENST00000624558 1573 ntBASIC18.04■□□□□ 0.48
TCRAP04437 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRAP04437 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRAP04437 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRAP04437 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRAP04437 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRAP04437 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRAP04437 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRAP04437 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRAP04437 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.02■□□□□ 0.48
TCRAP04437 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TCRAP04437 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TCRAP04437 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TCRAP04437 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TCRAP04437 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
TCRAP04437 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.02■□□□□ 0.47
TCRAP04437 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRAP04437 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRAP04437 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRAP04437 LINC01971-201ENST00000617888 1048 ntBASIC18.01■□□□□ 0.47
TCRAP04437 AC068473.5-201ENST00000616428 2072 ntBASIC18.01■□□□□ 0.47
TCRAP04437 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TCRAP04437 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRAP04437 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRAP04437 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRAP04437 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
TCRAP04437 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRAP04437 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18■□□□□ 0.47
TCRAP04437 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms