Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFF1P04155 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TFF1P04155 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFF1P04155 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TFF1P04155 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TFF1P04155 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TFF1P04155 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TFF1P04155 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TFF1P04155 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TFF1P04155 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.05■□□□□ 0.8
TFF1P04155 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TFF1P04155 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TFF1P04155 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.05■□□□□ 0.8
TFF1P04155 NTF6A-201ENST00000591175 560 ntBASIC20.05■□□□□ 0.8
TFF1P04155 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TFF1P04155 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFF1P04155 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
TFF1P04155 DUX4L9-201ENST00000449051 1259 ntBASIC20.04■□□□□ 0.8
TFF1P04155 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFF1P04155 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFF1P04155 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.04■□□□□ 0.8
TFF1P04155 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TFF1P04155 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFF1P04155 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.03■□□□□ 0.8
TFF1P04155 AC129492.7-201ENST00000622992 756 ntBASIC20.03■□□□□ 0.8
TFF1P04155 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFF1P04155 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
TFF1P04155 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFF1P04155 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TFF1P04155 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TFF1P04155 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFF1P04155 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TFF1P04155 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.02■□□□□ 0.8
TFF1P04155 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TFF1P04155 DUX4L18-201ENST00000553347 1267 ntBASIC20.02■□□□□ 0.8
TFF1P04155 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFF1P04155 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TFF1P04155 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TFF1P04155 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TFF1P04155 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TFF1P04155 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.01■□□□□ 0.79
TFF1P04155 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.01■□□□□ 0.79
TFF1P04155 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TFF1P04155 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TFF1P04155 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TFF1P04155 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20■□□□□ 0.79
TFF1P04155 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20■□□□□ 0.79
TFF1P04155 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TFF1P04155 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TFF1P04155 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.99■□□□□ 0.79
TFF1P04155 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TFF1P04155 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.99■□□□□ 0.79
TFF1P04155 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TFF1P04155 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TFF1P04155 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TFF1P04155 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TFF1P04155 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TFF1P04155 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TFF1P04155 AC097639.1-201ENST00000565519 1891 ntBASIC19.98■□□□□ 0.79
TFF1P04155 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TFF1P04155 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TFF1P04155 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TFF1P04155 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TFF1P04155 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TFF1P04155 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TFF1P04155 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.97■□□□□ 0.79
TFF1P04155 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TFF1P04155 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
TFF1P04155 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TFF1P04155 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.97■□□□□ 0.79
TFF1P04155 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.97■□□□□ 0.79
TFF1P04155 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TFF1P04155 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TFF1P04155 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TFF1P04155 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TFF1P04155 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.95■□□□□ 0.78
TFF1P04155 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TFF1P04155 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TFF1P04155 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.95■□□□□ 0.78
TFF1P04155 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.95■□□□□ 0.78
TFF1P04155 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TFF1P04155 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
TFF1P04155 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TFF1P04155 AC004987.1-201ENST00000428627 508 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms