Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-AP01891 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-AP01891 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-AP01891 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-AP01891 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-AP01891 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-AP01891 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-AP01891 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HLA-AP01891 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20■□□□□ 0.79
HLA-AP01891 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20■□□□□ 0.79
HLA-AP01891 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HLA-AP01891 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20■□□□□ 0.79
HLA-AP01891 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20■□□□□ 0.79
HLA-AP01891 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20■□□□□ 0.79
HLA-AP01891 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-AP01891 LINC00543-201ENST00000567234 1845 ntBASIC19.99■□□□□ 0.79
HLA-AP01891 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-AP01891 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-AP01891 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-AP01891 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-AP01891 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-AP01891 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-AP01891 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-AP01891 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-AP01891 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-AP01891 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-AP01891 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-AP01891 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-AP01891 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-AP01891 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-AP01891 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
HLA-AP01891 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-AP01891 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
HLA-AP01891 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-AP01891 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-AP01891 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-AP01891 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.95■□□□□ 0.78
HLA-AP01891 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-AP01891 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-AP01891 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-AP01891 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-AP01891 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-AP01891 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 DUSP8P5-201ENST00000422884 1815 ntBASIC19.93■□□□□ 0.78
HLA-AP01891 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HLA-AP01891 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-AP01891 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-AP01891 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-AP01891 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-AP01891 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-AP01891 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-AP01891 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-AP01891 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 AC021231.2-201ENST00000594613 730 ntBASIC19.91■□□□□ 0.78
HLA-AP01891 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
HLA-AP01891 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HLA-AP01891 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-AP01891 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-AP01891 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-AP01891 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-AP01891 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HLA-AP01891 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-AP01891 DUX4L29-201ENST00000425409 679 ntBASIC19.9■□□□□ 0.78
HLA-AP01891 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-AP01891 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-AP01891 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms