Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF13O75888 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF13O75888 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF13O75888 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFSF13O75888 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF13O75888 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF13O75888 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.14■□□□□ 0.97
TNFSF13O75888 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TNFSF13O75888 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
TNFSF13O75888 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF13O75888 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF13O75888 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.13■□□□□ 0.97
TNFSF13O75888 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.13■□□□□ 0.97
TNFSF13O75888 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TNFSF13O75888 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF13O75888 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF13O75888 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF13O75888 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF13O75888 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF13O75888 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TNFSF13O75888 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TNFSF13O75888 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF13O75888 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.12■□□□□ 0.97
TNFSF13O75888 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF13O75888 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.12■□□□□ 0.97
TNFSF13O75888 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFSF13O75888 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TNFSF13O75888 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TNFSF13O75888 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF13O75888 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TNFSF13O75888 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF13O75888 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF13O75888 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF13O75888 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF13O75888 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
TNFSF13O75888 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFSF13O75888 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFSF13O75888 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF13O75888 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TNFSF13O75888 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TNFSF13O75888 GUSBP5-201ENST00000418136 578 ntBASIC21.09■□□□□ 0.97
TNFSF13O75888 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF13O75888 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF13O75888 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF13O75888 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
TNFSF13O75888 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF13O75888 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFSF13O75888 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFSF13O75888 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF13O75888 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF13O75888 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TNFSF13O75888 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.06■□□□□ 0.96
TNFSF13O75888 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
TNFSF13O75888 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF13O75888 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF13O75888 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF13O75888 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFSF13O75888 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 Z92544.1-202ENST00000571933 1220 ntBASIC21.05■□□□□ 0.96
TNFSF13O75888 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFSF13O75888 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF13O75888 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFSF13O75888 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF13O75888 AL592295.1-201ENST00000400984 884 ntBASIC21.04■□□□□ 0.96
TNFSF13O75888 AC239859.2-201ENST00000444165 318 ntBASIC21.04■□□□□ 0.96
TNFSF13O75888 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF13O75888 THA1P-201ENST00000590384 1145 ntBASIC21.04■□□□□ 0.96
TNFSF13O75888 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TNFSF13O75888 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF13O75888 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF13O75888 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF13O75888 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
TNFSF13O75888 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF13O75888 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF13O75888 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFSF13O75888 AC120024.1-201ENST00000562672 995 ntBASIC21.03■□□□□ 0.96
TNFSF13O75888 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFSF13O75888 AL121749.1-202ENST00000609313 2153 ntBASIC21.02■□□□□ 0.96
TNFSF13O75888 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms