Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP200O75643 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP200O75643 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SNRNP200O75643 AC087393.1-201ENST00000582896 145 ntBASIC23.02■■□□□ 1.28
SNRNP200O75643 MIR4508-201ENST00000584178 70 ntBASIC23.02■■□□□ 1.28
SNRNP200O75643 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP200O75643 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.02■■□□□ 1.28
SNRNP200O75643 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP200O75643 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP200O75643 AC103724.3-201ENST00000564481 992 ntBASIC23.02■■□□□ 1.28
SNRNP200O75643 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP200O75643 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP200O75643 RARRES2P1-201ENST00000474487 481 ntBASIC23.01■■□□□ 1.27
SNRNP200O75643 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.01■■□□□ 1.27
SNRNP200O75643 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.01■■□□□ 1.27
SNRNP200O75643 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.01■■□□□ 1.27
SNRNP200O75643 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SNRNP200O75643 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23■■□□□ 1.27
SNRNP200O75643 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SNRNP200O75643 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23■■□□□ 1.27
SNRNP200O75643 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNRNP200O75643 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SNRNP200O75643 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNRNP200O75643 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
SNRNP200O75643 RPS2P7-201ENST00000447334 885 ntBASIC22.99■■□□□ 1.27
SNRNP200O75643 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.99■■□□□ 1.27
SNRNP200O75643 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNRNP200O75643 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNRNP200O75643 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.99■■□□□ 1.27
SNRNP200O75643 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNRNP200O75643 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SNRNP200O75643 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNRNP200O75643 AC091060.1-201ENST00000623524 1766 ntBASIC22.98■■□□□ 1.27
SNRNP200O75643 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNRNP200O75643 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SNRNP200O75643 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNRNP200O75643 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNRNP200O75643 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNRNP200O75643 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNRNP200O75643 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNRNP200O75643 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNRNP200O75643 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.96■■□□□ 1.27
SNRNP200O75643 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SNRNP200O75643 AC097639.1-201ENST00000565519 1891 ntBASIC22.96■■□□□ 1.27
SNRNP200O75643 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SNRNP200O75643 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNRNP200O75643 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.96■■□□□ 1.27
SNRNP200O75643 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNRNP200O75643 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SNRNP200O75643 AC010980.1-201ENST00000587192 1142 ntBASIC22.96■■□□□ 1.27
SNRNP200O75643 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.96■■□□□ 1.27
SNRNP200O75643 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.96■■□□□ 1.27
SNRNP200O75643 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNRNP200O75643 DUSP8P4-201ENST00000399538 1761 ntBASIC22.95■■□□□ 1.26
SNRNP200O75643 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.95■■□□□ 1.26
SNRNP200O75643 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
SNRNP200O75643 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNRNP200O75643 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.95■■□□□ 1.26
SNRNP200O75643 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNRNP200O75643 AL451085.2-201ENST00000605085 799 ntBASIC22.94■■□□□ 1.26
SNRNP200O75643 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNRNP200O75643 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNRNP200O75643 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNRNP200O75643 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.94■■□□□ 1.26
SNRNP200O75643 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
SNRNP200O75643 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.93■■□□□ 1.26
SNRNP200O75643 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNRNP200O75643 KRT18P10-201ENST00000388836 1287 ntBASIC22.93■■□□□ 1.26
SNRNP200O75643 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.93■■□□□ 1.26
SNRNP200O75643 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.93■■□□□ 1.26
SNRNP200O75643 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.93■■□□□ 1.26
SNRNP200O75643 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.93■■□□□ 1.26
SNRNP200O75643 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNRNP200O75643 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNRNP200O75643 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNRNP200O75643 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SNRNP200O75643 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SNRNP200O75643 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNRNP200O75643 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
SNRNP200O75643 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNRNP200O75643 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.92■■□□□ 1.26
SNRNP200O75643 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNRNP200O75643 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNRNP200O75643 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNRNP200O75643 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.91■■□□□ 1.26
SNRNP200O75643 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNRNP200O75643 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.91■■□□□ 1.26
SNRNP200O75643 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SNRNP200O75643 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNRNP200O75643 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNRNP200O75643 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNRNP200O75643 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNRNP200O75643 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNRNP200O75643 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNRNP200O75643 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNRNP200O75643 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNRNP200O75643 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SNRNP200O75643 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SNRNP200O75643 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNRNP200O75643 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms