Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX39AO00148 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX39AO00148 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.98■■□□□ 1.91
DDX39AO00148 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
DDX39AO00148 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
DDX39AO00148 YBX1P4-201ENST00000392794 808 ntBASIC26.97■■□□□ 1.91
DDX39AO00148 LONRF2P2-201ENST00000439212 571 ntBASIC26.97■■□□□ 1.91
DDX39AO00148 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.97■■□□□ 1.91
DDX39AO00148 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
DDX39AO00148 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.96■■□□□ 1.91
DDX39AO00148 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX39AO00148 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
DDX39AO00148 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX39AO00148 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.95■■□□□ 1.91
DDX39AO00148 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
DDX39AO00148 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
DDX39AO00148 KRT18P10-201ENST00000388836 1287 ntBASIC26.95■■□□□ 1.9
DDX39AO00148 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX39AO00148 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.95■■□□□ 1.9
DDX39AO00148 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX39AO00148 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.94■■□□□ 1.9
DDX39AO00148 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.94■■□□□ 1.9
DDX39AO00148 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX39AO00148 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX39AO00148 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.94■■□□□ 1.9
DDX39AO00148 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.94■■□□□ 1.9
DDX39AO00148 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
DDX39AO00148 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
DDX39AO00148 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX39AO00148 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.93■■□□□ 1.9
DDX39AO00148 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.93■■□□□ 1.9
DDX39AO00148 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX39AO00148 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX39AO00148 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX39AO00148 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX39AO00148 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.92■■□□□ 1.9
DDX39AO00148 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX39AO00148 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX39AO00148 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
DDX39AO00148 AL451085.2-201ENST00000605085 799 ntBASIC26.92■■□□□ 1.9
DDX39AO00148 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.92■■□□□ 1.9
DDX39AO00148 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
DDX39AO00148 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
DDX39AO00148 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.91■■□□□ 1.9
DDX39AO00148 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
DDX39AO00148 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
DDX39AO00148 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX39AO00148 MIR4508-201ENST00000584178 70 ntBASIC26.91■■□□□ 1.9
DDX39AO00148 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX39AO00148 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
DDX39AO00148 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX39AO00148 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
DDX39AO00148 AC096887.2-201ENST00000623443 1957 ntBASIC26.9■■□□□ 1.9
DDX39AO00148 AC092803.2-201ENST00000564287 1899 ntBASIC26.9■■□□□ 1.9
DDX39AO00148 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
DDX39AO00148 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX39AO00148 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX39AO00148 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX39AO00148 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
DDX39AO00148 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.89■■□□□ 1.9
DDX39AO00148 AC019171.1-201ENST00000601251 1056 ntBASIC26.89■■□□□ 1.9
DDX39AO00148 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
DDX39AO00148 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.89■■□□□ 1.89
DDX39AO00148 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.89■■□□□ 1.89
DDX39AO00148 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX39AO00148 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.88■■□□□ 1.89
DDX39AO00148 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.88■■□□□ 1.89
DDX39AO00148 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX39AO00148 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
DDX39AO00148 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
DDX39AO00148 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
DDX39AO00148 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
DDX39AO00148 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX39AO00148 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.87■■□□□ 1.89
DDX39AO00148 AC103724.3-201ENST00000564481 992 ntBASIC26.87■■□□□ 1.89
DDX39AO00148 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX39AO00148 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.87■■□□□ 1.89
DDX39AO00148 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX39AO00148 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.86■■□□□ 1.89
DDX39AO00148 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.86■■□□□ 1.89
DDX39AO00148 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
DDX39AO00148 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.86■■□□□ 1.89
DDX39AO00148 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.86■■□□□ 1.89
DDX39AO00148 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX39AO00148 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX39AO00148 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX39AO00148 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX39AO00148 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.85■■□□□ 1.89
DDX39AO00148 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
DDX39AO00148 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX39AO00148 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX39AO00148 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX39AO00148 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX39AO00148 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms