Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMX3A6NHT5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
HMX3A6NHT5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMX3A6NHT5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMX3A6NHT5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.57■□□□□ 0.88
HMX3A6NHT5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMX3A6NHT5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 AC142472.1-201ENST00000612013 1741 ntBASIC20.56■□□□□ 0.88
HMX3A6NHT5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMX3A6NHT5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMX3A6NHT5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMX3A6NHT5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.56■□□□□ 0.88
HMX3A6NHT5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HMX3A6NHT5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.55■□□□□ 0.88
HMX3A6NHT5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMX3A6NHT5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMX3A6NHT5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
HMX3A6NHT5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.55■□□□□ 0.88
HMX3A6NHT5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMX3A6NHT5 LINC00565-201ENST00000562710 2331 ntBASIC20.55■□□□□ 0.88
HMX3A6NHT5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMX3A6NHT5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMX3A6NHT5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.54■□□□□ 0.88
HMX3A6NHT5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HMX3A6NHT5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMX3A6NHT5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HMX3A6NHT5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMX3A6NHT5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
HMX3A6NHT5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMX3A6NHT5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMX3A6NHT5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMX3A6NHT5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.52■□□□□ 0.88
HMX3A6NHT5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.52■□□□□ 0.88
HMX3A6NHT5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.52■□□□□ 0.87
HMX3A6NHT5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
HMX3A6NHT5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMX3A6NHT5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMX3A6NHT5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMX3A6NHT5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMX3A6NHT5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.51■□□□□ 0.87
HMX3A6NHT5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.51■□□□□ 0.87
HMX3A6NHT5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMX3A6NHT5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMX3A6NHT5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMX3A6NHT5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMX3A6NHT5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.5■□□□□ 0.87
HMX3A6NHT5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMX3A6NHT5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMX3A6NHT5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 AP003733.4-201ENST00000623785 1697 ntBASIC20.49■□□□□ 0.87
HMX3A6NHT5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 DUX4L28-201ENST00000623687 678 ntBASIC20.49■□□□□ 0.87
HMX3A6NHT5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMX3A6NHT5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMX3A6NHT5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.49■□□□□ 0.87
HMX3A6NHT5 C9orf163-202ENST00000624034 2573 ntBASIC20.48■□□□□ 0.87
HMX3A6NHT5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
HMX3A6NHT5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMX3A6NHT5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMX3A6NHT5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMX3A6NHT5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.48■□□□□ 0.87
HMX3A6NHT5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.48■□□□□ 0.87
HMX3A6NHT5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMX3A6NHT5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms