Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF216Q9NWF9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RNF216Q9NWF9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF216Q9NWF9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF216Q9NWF9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF216Q9NWF9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF216Q9NWF9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RNF216Q9NWF9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 AC018755.3-202ENST00000596210 929 ntBASIC26.89■■□□□ 1.9
RNF216Q9NWF9 MIR6765-201ENST00000614092 87 ntBASIC26.89■■□□□ 1.9
RNF216Q9NWF9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RNF216Q9NWF9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF216Q9NWF9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF216Q9NWF9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF216Q9NWF9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF216Q9NWF9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF216Q9NWF9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF216Q9NWF9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF216Q9NWF9 AC026790.2-201ENST00000606282 430 ntBASIC26.88■■□□□ 1.89
RNF216Q9NWF9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF216Q9NWF9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF216Q9NWF9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RNF216Q9NWF9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.86■■□□□ 1.89
RNF216Q9NWF9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.86■■□□□ 1.89
RNF216Q9NWF9 AC139795.1-202ENST00000500444 432 ntBASIC26.86■■□□□ 1.89
RNF216Q9NWF9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.86■■□□□ 1.89
RNF216Q9NWF9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF216Q9NWF9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF216Q9NWF9 LINC01003-201ENST00000564834 1764 ntBASIC26.85■■□□□ 1.89
RNF216Q9NWF9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF216Q9NWF9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF216Q9NWF9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.85■■□□□ 1.89
RNF216Q9NWF9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 AC137695.1-201ENST00000604126 489 ntBASIC26.84■■□□□ 1.89
RNF216Q9NWF9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RNF216Q9NWF9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF216Q9NWF9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.88
RNF216Q9NWF9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF216Q9NWF9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF216Q9NWF9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF216Q9NWF9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF216Q9NWF9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.81■■□□□ 1.88
RNF216Q9NWF9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF216Q9NWF9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RNF216Q9NWF9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC26.79■■□□□ 1.88
RNF216Q9NWF9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF216Q9NWF9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF216Q9NWF9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.78■■□□□ 1.88
RNF216Q9NWF9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.78■■□□□ 1.88
RNF216Q9NWF9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.78■■□□□ 1.88
RNF216Q9NWF9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
RNF216Q9NWF9 YBX1P4-201ENST00000392794 808 ntBASIC26.77■■□□□ 1.88
RNF216Q9NWF9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF216Q9NWF9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF216Q9NWF9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF216Q9NWF9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RNF216Q9NWF9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF216Q9NWF9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF216Q9NWF9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF216Q9NWF9 SPCS2P3-201ENST00000500401 656 ntBASIC26.76■■□□□ 1.87
RNF216Q9NWF9 AL359504.2-201ENST00000605506 1601 ntBASIC26.76■■□□□ 1.87
RNF216Q9NWF9 WHAMMP3-201ENST00000611636 1609 ntBASIC26.76■■□□□ 1.87
RNF216Q9NWF9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms