Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS11Q9H270 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.06■■□□□ 1.44
VPS11Q9H270 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
VPS11Q9H270 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS11Q9H270 AL359504.2-201ENST00000605506 1601 ntBASIC24.06■■□□□ 1.44
VPS11Q9H270 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.05■■□□□ 1.44
VPS11Q9H270 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS11Q9H270 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS11Q9H270 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS11Q9H270 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
VPS11Q9H270 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.05■■□□□ 1.44
VPS11Q9H270 ZNRF2P2-203ENST00000454624 420 ntBASIC24.05■■□□□ 1.44
VPS11Q9H270 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.05■■□□□ 1.44
VPS11Q9H270 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS11Q9H270 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.05■■□□□ 1.44
VPS11Q9H270 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
VPS11Q9H270 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS11Q9H270 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS11Q9H270 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
VPS11Q9H270 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS11Q9H270 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS11Q9H270 AC096887.2-201ENST00000623443 1957 ntBASIC24.04■■□□□ 1.44
VPS11Q9H270 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS11Q9H270 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
VPS11Q9H270 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
VPS11Q9H270 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS11Q9H270 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
VPS11Q9H270 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS11Q9H270 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS11Q9H270 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS11Q9H270 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS11Q9H270 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS11Q9H270 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS11Q9H270 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS11Q9H270 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS11Q9H270 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS11Q9H270 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS11Q9H270 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24■■□□□ 1.43
VPS11Q9H270 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS11Q9H270 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24■■□□□ 1.43
VPS11Q9H270 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.99■■□□□ 1.43
VPS11Q9H270 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS11Q9H270 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS11Q9H270 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS11Q9H270 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.98■■□□□ 1.43
VPS11Q9H270 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS11Q9H270 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
VPS11Q9H270 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS11Q9H270 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VPS11Q9H270 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
VPS11Q9H270 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS11Q9H270 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.97■■□□□ 1.43
VPS11Q9H270 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS11Q9H270 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VPS11Q9H270 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS11Q9H270 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS11Q9H270 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
VPS11Q9H270 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS11Q9H270 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS11Q9H270 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS11Q9H270 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
VPS11Q9H270 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS11Q9H270 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
VPS11Q9H270 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS11Q9H270 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS11Q9H270 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.95■■□□□ 1.42
VPS11Q9H270 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS11Q9H270 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VPS11Q9H270 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS11Q9H270 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS11Q9H270 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS11Q9H270 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS11Q9H270 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS11Q9H270 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS11Q9H270 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS11Q9H270 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS11Q9H270 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS11Q9H270 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
VPS11Q9H270 CR559946.2-201ENST00000623684 991 ntBASIC23.93■■□□□ 1.42
VPS11Q9H270 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS11Q9H270 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS11Q9H270 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
VPS11Q9H270 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms