Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.11■■■□□ 2.57
ZNF428Q96B54 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.11■■■□□ 2.57
ZNF428Q96B54 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
ZNF428Q96B54 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
ZNF428Q96B54 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
ZNF428Q96B54 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
ZNF428Q96B54 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.09■■■□□ 2.57
ZNF428Q96B54 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
ZNF428Q96B54 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.09■■■□□ 2.57
ZNF428Q96B54 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.09■■■□□ 2.57
ZNF428Q96B54 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ZNF428Q96B54 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.09■■■□□ 2.57
ZNF428Q96B54 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.08■■■□□ 2.57
ZNF428Q96B54 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.08■■■□□ 2.57
ZNF428Q96B54 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ZNF428Q96B54 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ZNF428Q96B54 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ZNF428Q96B54 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.07■■■□□ 2.56
ZNF428Q96B54 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
ZNF428Q96B54 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
ZNF428Q96B54 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ZNF428Q96B54 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZNF428Q96B54 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
ZNF428Q96B54 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZNF428Q96B54 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.06■■■□□ 2.56
ZNF428Q96B54 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZNF428Q96B54 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.05■■■□□ 2.56
ZNF428Q96B54 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ZNF428Q96B54 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ZNF428Q96B54 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
ZNF428Q96B54 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ZNF428Q96B54 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ZNF428Q96B54 AC010980.1-201ENST00000587192 1142 ntBASIC31.04■■■□□ 2.56
ZNF428Q96B54 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
ZNF428Q96B54 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
ZNF428Q96B54 ERN1-208ENST00000606895 2068 ntBASIC31.04■■■□□ 2.56
ZNF428Q96B54 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ZNF428Q96B54 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ZNF428Q96B54 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ZNF428Q96B54 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.03■■■□□ 2.56
ZNF428Q96B54 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF428Q96B54 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.02■■■□□ 2.56
ZNF428Q96B54 KRT8P33-201ENST00000508125 1423 ntBASIC31.02■■■□□ 2.56
ZNF428Q96B54 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF428Q96B54 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF428Q96B54 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF428Q96B54 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF428Q96B54 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.01■■■□□ 2.56
ZNF428Q96B54 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
ZNF428Q96B54 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.01■■■□□ 2.55
ZNF428Q96B54 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ZNF428Q96B54 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
ZNF428Q96B54 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
ZNF428Q96B54 BHLHE23-202ENST00000612929 1109 ntBASIC31■■■□□ 2.55
ZNF428Q96B54 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31■■■□□ 2.55
ZNF428Q96B54 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ZNF428Q96B54 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ZNF428Q96B54 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.98■■■□□ 2.55
ZNF428Q96B54 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
ZNF428Q96B54 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZNF428Q96B54 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZNF428Q96B54 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.97■■■□□ 2.55
ZNF428Q96B54 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZNF428Q96B54 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
ZNF428Q96B54 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
ZNF428Q96B54 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.96■■■□□ 2.55
ZNF428Q96B54 AC096887.2-201ENST00000623443 1957 ntBASIC30.96■■■□□ 2.55
ZNF428Q96B54 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ZNF428Q96B54 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
ZNF428Q96B54 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.95■■■□□ 2.55
ZNF428Q96B54 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
ZNF428Q96B54 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ZNF428Q96B54 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZNF428Q96B54 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ZNF428Q96B54 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.93■■■□□ 2.54
ZNF428Q96B54 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.93■■■□□ 2.54
ZNF428Q96B54 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF428Q96B54 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF428Q96B54 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.92■■■□□ 2.54
ZNF428Q96B54 PVT1_1.1-201ENST00000615125 194 ntBASIC30.92■■■□□ 2.54
ZNF428Q96B54 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF428Q96B54 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZNF428Q96B54 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZNF428Q96B54 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZNF428Q96B54 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ZNF428Q96B54 KRT18P10-201ENST00000388836 1287 ntBASIC30.9■■■□□ 2.54
ZNF428Q96B54 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
ZNF428Q96B54 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.9■■■□□ 2.54
ZNF428Q96B54 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
ZNF428Q96B54 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
ZNF428Q96B54 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
ZNF428Q96B54 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ZNF428Q96B54 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.89■■■□□ 2.54
ZNF428Q96B54 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
ZNF428Q96B54 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
ZNF428Q96B54 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ZNF428Q96B54 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.89■■■□□ 2.54
ZNF428Q96B54 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.89■■■□□ 2.53
ZNF428Q96B54 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ZNF428Q96B54 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms