Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 AC138932.3-201ENST00000567634 1902 ntBASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 AL139125.2-201ENST00000623134 1869 ntBASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 AL359258.2-201ENST00000564063 1566 ntBASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.02■□□□□ 0.79
RTN4IP1Q8WWV3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 AC126177.7-201ENST00000547904 679 ntBASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms