Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.08■□□□□ 0.8
RTN4IP1Q8WWV3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 AC138932.3-201ENST00000567634 1902 ntBASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4IP1Q8WWV3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4IP1Q8WWV3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 AL139125.2-201ENST00000623134 1869 ntBASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4IP1Q8WWV3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4IP1Q8WWV3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4IP1Q8WWV3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 AL359258.2-201ENST00000564063 1566 ntBASIC20.02■□□□□ 0.8
RTN4IP1Q8WWV3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.02■□□□□ 0.79
RTN4IP1Q8WWV3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4IP1Q8WWV3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 AC126177.7-201ENST00000547904 679 ntBASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20■□□□□ 0.79
RTN4IP1Q8WWV3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RTN4IP1Q8WWV3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4IP1Q8WWV3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms