Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 AC096887.2-201ENST00000623443 1957 ntBASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC9CQ8N5M4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 AC093536.1-201ENST00000569153 554 ntBASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 RNF126P1-201ENST00000567452 1320 ntBASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC9CQ8N5M4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TTC9CQ8N5M4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC9CQ8N5M4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC9CQ8N5M4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TTC9CQ8N5M4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TTC9CQ8N5M4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC9CQ8N5M4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.9■□□□□ 0.62
TTC9CQ8N5M4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC9CQ8N5M4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC9CQ8N5M4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 AC020928.2-201ENST00000588717 2197 ntBASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC9CQ8N5M4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 AC026202.3-201ENST00000600805 1127 ntBASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 RAP2CP1-202ENST00000605179 643 ntBASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC9CQ8N5M4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC9CQ8N5M4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
TTC9CQ8N5M4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC9CQ8N5M4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC9CQ8N5M4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC9CQ8N5M4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 AC097639.1-201ENST00000565519 1891 ntBASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC9CQ8N5M4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms