Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 KRT18P24-201ENST00000344739 1156 ntBASIC17.03■□□□□ 0.32
CSMD3Q7Z407 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD3Q7Z407 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD3Q7Z407 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CSMD3Q7Z407 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.02■□□□□ 0.32
CSMD3Q7Z407 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
CSMD3Q7Z407 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.02■□□□□ 0.32
CSMD3Q7Z407 AC133561.4-201ENST00000566112 224 ntBASIC17.02■□□□□ 0.32
CSMD3Q7Z407 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD3Q7Z407 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.02■□□□□ 0.31
CSMD3Q7Z407 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.02■□□□□ 0.31
CSMD3Q7Z407 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CSMD3Q7Z407 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CSMD3Q7Z407 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17■□□□□ 0.31
CSMD3Q7Z407 AC135279.3-201ENST00000610945 1311 ntBASIC17■□□□□ 0.31
CSMD3Q7Z407 SRR-208ENST00000576848 588 ntTSL 4 BASIC17■□□□□ 0.31
CSMD3Q7Z407 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
CSMD3Q7Z407 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17■□□□□ 0.31
CSMD3Q7Z407 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 AL031432.3-201ENST00000607698 485 ntBASIC16.99■□□□□ 0.31
CSMD3Q7Z407 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.99■□□□□ 0.31
CSMD3Q7Z407 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD3Q7Z407 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 TSPY9P-201ENST00000440215 945 ntBASIC16.97■□□□□ 0.31
CSMD3Q7Z407 TSPY11P-201ENST00000442607 1045 ntBASIC16.97■□□□□ 0.31
CSMD3Q7Z407 SUDS3P1-201ENST00000505831 966 ntBASIC16.97■□□□□ 0.31
CSMD3Q7Z407 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.97■□□□□ 0.31
CSMD3Q7Z407 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD3Q7Z407 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD3Q7Z407 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 MIR3621-201ENST00000580529 85 ntBASIC16.94■□□□□ 0.3
CSMD3Q7Z407 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD3Q7Z407 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD3Q7Z407 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CSMD3Q7Z407 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CSMD3Q7Z407 AL449106.1-201ENST00000608517 1980 ntBASIC16.93■□□□□ 0.3
CSMD3Q7Z407 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD3Q7Z407 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD3Q7Z407 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD3Q7Z407 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD3Q7Z407 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms