Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.38■□□□□ 0.85
MECP2P51608 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MECP2P51608 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MECP2P51608 LINC01124-201ENST00000409786 2117 ntBASIC20.36■□□□□ 0.85
MECP2P51608 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MECP2P51608 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
MECP2P51608 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.36■□□□□ 0.85
MECP2P51608 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
MECP2P51608 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
MECP2P51608 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.35■□□□□ 0.85
MECP2P51608 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
MECP2P51608 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MECP2P51608 AL162393.1-201ENST00000437852 946 ntBASIC20.35■□□□□ 0.85
MECP2P51608 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.35■□□□□ 0.85
MECP2P51608 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.35■□□□□ 0.85
MECP2P51608 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.35■□□□□ 0.85
MECP2P51608 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.35■□□□□ 0.85
MECP2P51608 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MECP2P51608 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MECP2P51608 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MECP2P51608 CLDN5-201ENST00000403084 2357 ntBASIC20.34■□□□□ 0.85
MECP2P51608 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.34■□□□□ 0.85
MECP2P51608 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.34■□□□□ 0.85
MECP2P51608 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MECP2P51608 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MECP2P51608 AC096887.2-201ENST00000623443 1957 ntBASIC20.34■□□□□ 0.85
MECP2P51608 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MECP2P51608 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MECP2P51608 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MECP2P51608 RPS2P35-201ENST00000443417 897 ntBASIC20.33■□□□□ 0.85
MECP2P51608 MIR3665-201ENST00000578708 105 ntBASIC20.33■□□□□ 0.85
MECP2P51608 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MECP2P51608 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.33■□□□□ 0.84
MECP2P51608 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MECP2P51608 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MECP2P51608 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MECP2P51608 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MECP2P51608 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
MECP2P51608 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 AP003733.4-201ENST00000623785 1697 ntBASIC20.32■□□□□ 0.84
MECP2P51608 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MECP2P51608 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MECP2P51608 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MECP2P51608 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MECP2P51608 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MECP2P51608 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MECP2P51608 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
MECP2P51608 DUX4L28-201ENST00000623687 678 ntBASIC20.3■□□□□ 0.84
MECP2P51608 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.3■□□□□ 0.84
MECP2P51608 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MECP2P51608 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MECP2P51608 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
MECP2P51608 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MECP2P51608 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MECP2P51608 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MECP2P51608 AC108673.1-201ENST00000510422 1159 ntBASIC20.29■□□□□ 0.84
MECP2P51608 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.29■□□□□ 0.84
MECP2P51608 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
MECP2P51608 DUSP8P5-201ENST00000422884 1815 ntBASIC20.29■□□□□ 0.84
MECP2P51608 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.28■□□□□ 0.84
MECP2P51608 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MECP2P51608 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MECP2P51608 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.27■□□□□ 0.84
MECP2P51608 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
MECP2P51608 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.27■□□□□ 0.84
MECP2P51608 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MECP2P51608 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MECP2P51608 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MECP2P51608 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MECP2P51608 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
MECP2P51608 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms