Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.13■□□□□ 0.97
ERCC1P07992 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ERCC1P07992 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC1P07992 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC1P07992 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC1P07992 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC1P07992 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC1P07992 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC1P07992 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC1P07992 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC1P07992 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC1P07992 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 SMPD5-203ENST00000639008 1464 ntBASIC21.11■□□□□ 0.97
ERCC1P07992 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
ERCC1P07992 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC1P07992 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.1■□□□□ 0.97
ERCC1P07992 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
ERCC1P07992 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC1P07992 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC1P07992 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC1P07992 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC1P07992 AL157400.5-201ENST00000507624 621 ntBASIC21.09■□□□□ 0.97
ERCC1P07992 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.09■□□□□ 0.97
ERCC1P07992 AC007029.1-201ENST00000604183 313 ntBASIC21.09■□□□□ 0.97
ERCC1P07992 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC1P07992 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC1P07992 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC1P07992 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC1P07992 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.08■□□□□ 0.97
ERCC1P07992 AC010501.1-201ENST00000606270 1962 ntBASIC21.08■□□□□ 0.96
ERCC1P07992 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC1P07992 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC1P07992 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC1P07992 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC1P07992 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
ERCC1P07992 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC1P07992 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC1P07992 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ERCC1P07992 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ERCC1P07992 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ERCC1P07992 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC1P07992 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ERCC1P07992 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC1P07992 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ERCC1P07992 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC1P07992 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.06■□□□□ 0.96
ERCC1P07992 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC1P07992 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC1P07992 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC1P07992 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ERCC1P07992 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC1P07992 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC1P07992 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC1P07992 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ERCC1P07992 U85056.1-201ENST00000616429 682 ntBASIC21.05■□□□□ 0.96
ERCC1P07992 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.05■□□□□ 0.96
ERCC1P07992 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ERCC1P07992 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.04■□□□□ 0.96
ERCC1P07992 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC1P07992 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC1P07992 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ERCC1P07992 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.04■□□□□ 0.96
ERCC1P07992 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ERCC1P07992 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC1P07992 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC1P07992 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC1P07992 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ERCC1P07992 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC1P07992 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.02■□□□□ 0.96
ERCC1P07992 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.02■□□□□ 0.96
ERCC1P07992 MIR3960-201ENST00000583311 91 ntBASIC21.02■□□□□ 0.96
ERCC1P07992 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC1P07992 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC1P07992 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC1P07992 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ERCC1P07992 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.01■□□□□ 0.95
ERCC1P07992 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.01■□□□□ 0.95
ERCC1P07992 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC1P07992 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC1P07992 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC1P07992 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21■□□□□ 0.95
ERCC1P07992 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
ERCC1P07992 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21■□□□□ 0.95
ERCC1P07992 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ERCC1P07992 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms