Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CTSDP07339 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTSDP07339 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CTSDP07339 AC012676.1-201ENST00000574705 1949 ntBASIC19.88■□□□□ 0.77
CTSDP07339 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSDP07339 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSDP07339 AL162393.1-201ENST00000437852 946 ntBASIC19.88■□□□□ 0.77
CTSDP07339 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSDP07339 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSDP07339 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSDP07339 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CTSDP07339 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSDP07339 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSDP07339 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 AC087741.3-201ENST00000624270 1347 ntBASIC19.86■□□□□ 0.77
CTSDP07339 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.86■□□□□ 0.77
CTSDP07339 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.86■□□□□ 0.77
CTSDP07339 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.86■□□□□ 0.77
CTSDP07339 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSDP07339 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTSDP07339 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSDP07339 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CTSDP07339 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTSDP07339 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 AC133561.1-201ENST00000568600 2415 ntBASIC19.84■□□□□ 0.77
CTSDP07339 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTSDP07339 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CTSDP07339 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSDP07339 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTSDP07339 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CTSDP07339 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSDP07339 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSDP07339 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CTSDP07339 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.83■□□□□ 0.77
CTSDP07339 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTSDP07339 AC097639.1-201ENST00000565519 1891 ntBASIC19.83■□□□□ 0.76
CTSDP07339 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CTSDP07339 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTSDP07339 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTSDP07339 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSDP07339 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.82■□□□□ 0.76
CTSDP07339 LINC00543-201ENST00000567234 1845 ntBASIC19.81■□□□□ 0.76
CTSDP07339 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTSDP07339 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.81■□□□□ 0.76
CTSDP07339 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSDP07339 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSDP07339 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSDP07339 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSDP07339 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSDP07339 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CTSDP07339 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSDP07339 AC044849.2-201ENST00000606596 710 ntBASIC19.8■□□□□ 0.76
CTSDP07339 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTSDP07339 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSDP07339 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTSDP07339 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTSDP07339 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSDP07339 AC021231.2-201ENST00000594613 730 ntBASIC19.79■□□□□ 0.76
CTSDP07339 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSDP07339 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSDP07339 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CTSDP07339 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSDP07339 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTSDP07339 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSDP07339 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 AC141586.4-201ENST00000624558 1573 ntBASIC19.78■□□□□ 0.76
CTSDP07339 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSDP07339 RPS2P35-201ENST00000443417 897 ntBASIC19.78■□□□□ 0.76
CTSDP07339 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.78■□□□□ 0.76
CTSDP07339 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSDP07339 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms