Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GAPDHP04406 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GAPDHP04406 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.98■□□□□ 0.79
GAPDHP04406 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GAPDHP04406 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.97■□□□□ 0.79
GAPDHP04406 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.97■□□□□ 0.79
GAPDHP04406 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.97■□□□□ 0.79
GAPDHP04406 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.97■□□□□ 0.79
GAPDHP04406 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GAPDHP04406 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GAPDHP04406 AC142472.1-201ENST00000612013 1741 ntBASIC19.96■□□□□ 0.79
GAPDHP04406 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GAPDHP04406 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GAPDHP04406 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.96■□□□□ 0.79
GAPDHP04406 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GAPDHP04406 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GAPDHP04406 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GAPDHP04406 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GAPDHP04406 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.96■□□□□ 0.79
GAPDHP04406 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
GAPDHP04406 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GAPDHP04406 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.95■□□□□ 0.78
GAPDHP04406 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
GAPDHP04406 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.95■□□□□ 0.78
GAPDHP04406 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
GAPDHP04406 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GAPDHP04406 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
GAPDHP04406 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GAPDHP04406 AC133561.1-201ENST00000568600 2415 ntBASIC19.94■□□□□ 0.78
GAPDHP04406 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GAPDHP04406 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GAPDHP04406 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.94■□□□□ 0.78
GAPDHP04406 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.94■□□□□ 0.78
GAPDHP04406 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.94■□□□□ 0.78
GAPDHP04406 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
GAPDHP04406 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GAPDHP04406 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GAPDHP04406 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.93■□□□□ 0.78
GAPDHP04406 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.93■□□□□ 0.78
GAPDHP04406 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GAPDHP04406 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GAPDHP04406 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GAPDHP04406 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GAPDHP04406 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GAPDHP04406 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.91■□□□□ 0.78
GAPDHP04406 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GAPDHP04406 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 AL139125.2-201ENST00000623134 1869 ntBASIC19.9■□□□□ 0.78
GAPDHP04406 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
GAPDHP04406 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 AC022413.1-201ENST00000624602 984 ntBASIC19.9■□□□□ 0.78
GAPDHP04406 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GAPDHP04406 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GAPDHP04406 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GAPDHP04406 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
GAPDHP04406 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GAPDHP04406 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.89■□□□□ 0.77
GAPDHP04406 AC060814.1-201ENST00000554326 538 ntBASIC19.89■□□□□ 0.77
GAPDHP04406 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.89■□□□□ 0.77
GAPDHP04406 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.89■□□□□ 0.77
GAPDHP04406 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GAPDHP04406 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.88■□□□□ 0.77
GAPDHP04406 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.88■□□□□ 0.77
GAPDHP04406 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GAPDHP04406 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GAPDHP04406 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GAPDHP04406 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
GAPDHP04406 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GAPDHP04406 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GAPDHP04406 AL359504.2-201ENST00000605506 1601 ntBASIC19.87■□□□□ 0.77
GAPDHP04406 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.86■□□□□ 0.77
GAPDHP04406 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GAPDHP04406 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GAPDHP04406 LINC00543-201ENST00000567234 1845 ntBASIC19.86■□□□□ 0.77
GAPDHP04406 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GAPDHP04406 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.86■□□□□ 0.77
GAPDHP04406 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms