Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.17■□□□□ 0.82
SPDEFO95238 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDEFO95238 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPDEFO95238 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDEFO95238 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.16■□□□□ 0.82
SPDEFO95238 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.16■□□□□ 0.82
SPDEFO95238 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDEFO95238 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
SPDEFO95238 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SPDEFO95238 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.15■□□□□ 0.82
SPDEFO95238 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SPDEFO95238 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPDEFO95238 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPDEFO95238 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.82
SPDEFO95238 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPDEFO95238 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPDEFO95238 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SPDEFO95238 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.14■□□□□ 0.81
SPDEFO95238 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SPDEFO95238 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPDEFO95238 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.14■□□□□ 0.81
SPDEFO95238 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPDEFO95238 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.14■□□□□ 0.81
SPDEFO95238 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.13■□□□□ 0.81
SPDEFO95238 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPDEFO95238 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SPDEFO95238 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPDEFO95238 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPDEFO95238 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPDEFO95238 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SPDEFO95238 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPDEFO95238 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPDEFO95238 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SPDEFO95238 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L13-201ENST00000554103 1267 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L15-201ENST00000611059 1267 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L23-201ENST00000615195 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L24-201ENST00000617576 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L22-201ENST00000618238 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L20-201ENST00000619712 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L21-201ENST00000622058 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L10-201ENST00000622460 1267 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 DUX4L25-201ENST00000624915 1269 ntBASIC20.11■□□□□ 0.81
SPDEFO95238 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPDEFO95238 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPDEFO95238 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SPDEFO95238 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPDEFO95238 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPDEFO95238 ZNRF2P2-203ENST00000454624 420 ntBASIC20.1■□□□□ 0.81
SPDEFO95238 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPDEFO95238 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPDEFO95238 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.1■□□□□ 0.81
SPDEFO95238 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPDEFO95238 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPDEFO95238 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPDEFO95238 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.09■□□□□ 0.81
SPDEFO95238 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.09■□□□□ 0.81
SPDEFO95238 DUX4L11-201ENST00000611504 1267 ntBASIC20.09■□□□□ 0.81
SPDEFO95238 DUX4L12-201ENST00000614593 1267 ntBASIC20.09■□□□□ 0.81
SPDEFO95238 DUX4L14-201ENST00000621227 1267 ntBASIC20.09■□□□□ 0.81
SPDEFO95238 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPDEFO95238 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
SPDEFO95238 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.08■□□□□ 0.81
SPDEFO95238 AC138932.3-201ENST00000567634 1902 ntBASIC20.08■□□□□ 0.81
SPDEFO95238 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPDEFO95238 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDEFO95238 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDEFO95238 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDEFO95238 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDEFO95238 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SPDEFO95238 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDEFO95238 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDEFO95238 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.06■□□□□ 0.8
SPDEFO95238 AP004609.3-201ENST00000610705 1884 ntBASIC20.06■□□□□ 0.8
SPDEFO95238 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDEFO95238 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.06■□□□□ 0.8
SPDEFO95238 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms