Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
TSPAN1O60635 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TSPAN1O60635 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
TSPAN1O60635 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TSPAN1O60635 LONRF2P2-201ENST00000439212 571 ntBASIC26.33■■□□□ 1.81
TSPAN1O60635 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.33■■□□□ 1.81
TSPAN1O60635 AC019171.1-201ENST00000601251 1056 ntBASIC26.33■■□□□ 1.81
TSPAN1O60635 AL451085.2-201ENST00000605085 799 ntBASIC26.33■■□□□ 1.81
TSPAN1O60635 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
TSPAN1O60635 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TSPAN1O60635 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.32■■□□□ 1.8
TSPAN1O60635 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.32■■□□□ 1.8
TSPAN1O60635 KRT18P10-201ENST00000388836 1287 ntBASIC26.32■■□□□ 1.8
TSPAN1O60635 MIR4508-201ENST00000584178 70 ntBASIC26.32■■□□□ 1.8
TSPAN1O60635 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TSPAN1O60635 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.31■■□□□ 1.8
TSPAN1O60635 YBX1P4-201ENST00000392794 808 ntBASIC26.31■■□□□ 1.8
TSPAN1O60635 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.31■■□□□ 1.8
TSPAN1O60635 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.31■■□□□ 1.8
TSPAN1O60635 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.31■■□□□ 1.8
TSPAN1O60635 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TSPAN1O60635 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TSPAN1O60635 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TSPAN1O60635 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.3■■□□□ 1.8
TSPAN1O60635 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TSPAN1O60635 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TSPAN1O60635 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.3■■□□□ 1.8
TSPAN1O60635 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TSPAN1O60635 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.3■■□□□ 1.8
TSPAN1O60635 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TSPAN1O60635 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.3■■□□□ 1.8
TSPAN1O60635 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TSPAN1O60635 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TSPAN1O60635 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TSPAN1O60635 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.29■■□□□ 1.8
TSPAN1O60635 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.29■■□□□ 1.8
TSPAN1O60635 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.28■■□□□ 1.8
TSPAN1O60635 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TSPAN1O60635 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TSPAN1O60635 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TSPAN1O60635 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN1O60635 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN1O60635 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN1O60635 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.26■■□□□ 1.79
TSPAN1O60635 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TSPAN1O60635 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.26■■□□□ 1.79
TSPAN1O60635 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN1O60635 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TSPAN1O60635 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.25■■□□□ 1.79
TSPAN1O60635 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TSPAN1O60635 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TSPAN1O60635 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TSPAN1O60635 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TSPAN1O60635 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.24■■□□□ 1.79
TSPAN1O60635 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TSPAN1O60635 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TSPAN1O60635 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TSPAN1O60635 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TSPAN1O60635 AL121749.1-202ENST00000609313 2153 ntBASIC26.23■■□□□ 1.79
TSPAN1O60635 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TSPAN1O60635 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TSPAN1O60635 AC103724.3-201ENST00000564481 992 ntBASIC26.23■■□□□ 1.79
TSPAN1O60635 AL035685.1-201ENST00000636663 812 ntBASIC26.23■■□□□ 1.79
TSPAN1O60635 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TSPAN1O60635 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.22■■□□□ 1.79
TSPAN1O60635 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TSPAN1O60635 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.22■■□□□ 1.79
TSPAN1O60635 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TSPAN1O60635 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TSPAN1O60635 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.22■■□□□ 1.79
TSPAN1O60635 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.22■■□□□ 1.79
TSPAN1O60635 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.22■■□□□ 1.79
TSPAN1O60635 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TSPAN1O60635 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TSPAN1O60635 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
TSPAN1O60635 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN1O60635 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN1O60635 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.19■■□□□ 1.78
TSPAN1O60635 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN1O60635 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.19■■□□□ 1.78
TSPAN1O60635 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TSPAN1O60635 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN1O60635 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN1O60635 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
TSPAN1O60635 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.18■■□□□ 1.78
TSPAN1O60635 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
TSPAN1O60635 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.18■■□□□ 1.78
TSPAN1O60635 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN1O60635 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN1O60635 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TSPAN1O60635 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN1O60635 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
TSPAN1O60635 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TSPAN1O60635 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TSPAN1O60635 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms