Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.7■■□□□ 1.7
PCDHGC3Q9UN70 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
PCDHGC3Q9UN70 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGC3Q9UN70 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PCDHGC3Q9UN70 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGC3Q9UN70 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGC3Q9UN70 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHGC3Q9UN70 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PCDHGC3Q9UN70 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGC3Q9UN70 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHGC3Q9UN70 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGC3Q9UN70 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 AC093536.1-201ENST00000569153 554 ntBASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 HSD17B1P1-201ENST00000590052 955 ntBASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC3Q9UN70 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC3Q9UN70 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC3Q9UN70 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC3Q9UN70 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGC3Q9UN70 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHGC3Q9UN70 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PCDHGC3Q9UN70 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
PCDHGC3Q9UN70 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHGC3Q9UN70 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
PCDHGC3Q9UN70 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGC3Q9UN70 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHGC3Q9UN70 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGC3Q9UN70 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGC3Q9UN70 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGC3Q9UN70 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 AC096887.2-201ENST00000623443 1957 ntBASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC3Q9UN70 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 RAP2CP1-202ENST00000605179 643 ntBASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGC3Q9UN70 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC3Q9UN70 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC3Q9UN70 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC3Q9UN70 AC026202.3-201ENST00000600805 1127 ntBASIC25.59■■□□□ 1.69
PCDHGC3Q9UN70 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGC3Q9UN70 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGC3Q9UN70 RARRES2P2-201ENST00000394842 485 ntBASIC25.58■■□□□ 1.69
PCDHGC3Q9UN70 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGC3Q9UN70 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGC3Q9UN70 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGC3Q9UN70 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHGC3Q9UN70 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGC3Q9UN70 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGC3Q9UN70 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
PCDHGC3Q9UN70 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHGC3Q9UN70 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGC3Q9UN70 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
PCDHGC3Q9UN70 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGC3Q9UN70 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGC3Q9UN70 AC009831.1-201ENST00000580420 1582 ntBASIC25.52■■□□□ 1.68
PCDHGC3Q9UN70 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGC3Q9UN70 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGC3Q9UN70 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGC3Q9UN70 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGC3Q9UN70 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDHGC3Q9UN70 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGC3Q9UN70 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDHGC3Q9UN70 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGC3Q9UN70 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHGC3Q9UN70 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGC3Q9UN70 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGC3Q9UN70 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGC3Q9UN70 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGC3Q9UN70 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms