Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 KRT18P24-201ENST00000344739 1156 ntBASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
RIMBP3Q9UFD9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 PBX2P1-201ENST00000493219 1291 ntBASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
RIMBP3Q9UFD9 RARRES2P11-201ENST00000635158 484 ntBASIC39.9■■■■□ 3.98
RIMBP3Q9UFD9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 RASSF1-AS1-201ENST00000629828 790 ntBASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 AC097381.1-201ENST00000429019 1296 ntBASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 AC105265.2-201ENST00000467189 838 ntBASIC39.85■■■■□ 3.97
RIMBP3Q9UFD9 AC010997.5-201ENST00000609182 354 ntBASIC39.85■■■■□ 3.97
RIMBP3Q9UFD9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 AL356740.2-201ENST00000601559 647 ntBASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 AC087623.3-201ENST00000607047 1098 ntBASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC39.81■■■■□ 3.96
RIMBP3Q9UFD9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC39.81■■■■□ 3.96
RIMBP3Q9UFD9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC39.78■■■■□ 3.96
RIMBP3Q9UFD9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC39.77■■■■□ 3.96
RIMBP3Q9UFD9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 MTDHP2-201ENST00000601468 714 ntBASIC39.76■■■■□ 3.95
RIMBP3Q9UFD9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC39.75■■■■□ 3.95
RIMBP3Q9UFD9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
RIMBP3Q9UFD9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC39.74■■■■□ 3.95
RIMBP3Q9UFD9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
RIMBP3Q9UFD9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
RIMBP3Q9UFD9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
RIMBP3Q9UFD9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 AC120024.1-201ENST00000562672 995 ntBASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 AK3-203ENST00000447596 705 ntTSL 2 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC39.63■■■■□ 3.94
RIMBP3Q9UFD9 AL359504.2-201ENST00000605506 1601 ntBASIC39.63■■■■□ 3.94
RIMBP3Q9UFD9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC39.63■■■■□ 3.93
RIMBP3Q9UFD9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms