Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 KRT8P33-201ENST00000508125 1423 ntBASIC21.92■■□□□ 1.1
ZNF407Q9C0G0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.92■■□□□ 1.1
ZNF407Q9C0G0 BHLHE23-202ENST00000612929 1109 ntBASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.91■■□□□ 1.1
ZNF407Q9C0G0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
ZNF407Q9C0G0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF407Q9C0G0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF407Q9C0G0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF407Q9C0G0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF407Q9C0G0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.89■■□□□ 1.09
ZNF407Q9C0G0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF407Q9C0G0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.88■■□□□ 1.09
ZNF407Q9C0G0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.88■■□□□ 1.09
ZNF407Q9C0G0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.88■■□□□ 1.09
ZNF407Q9C0G0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF407Q9C0G0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF407Q9C0G0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.86■■□□□ 1.09
ZNF407Q9C0G0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.85■■□□□ 1.09
ZNF407Q9C0G0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.84■■□□□ 1.09
ZNF407Q9C0G0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 AC087393.1-201ENST00000582896 145 ntBASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 AC018755.3-202ENST00000596210 929 ntBASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.83■■□□□ 1.09
ZNF407Q9C0G0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
ZNF407Q9C0G0 AC103834.1-201ENST00000520383 144 ntBASIC21.83■■□□□ 1.08
ZNF407Q9C0G0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF407Q9C0G0 AC142086.6-201ENST00000621154 1765 ntBASIC21.82■■□□□ 1.08
ZNF407Q9C0G0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF407Q9C0G0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF407Q9C0G0 AC142472.1-201ENST00000612013 1741 ntBASIC21.81■■□□□ 1.08
ZNF407Q9C0G0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF407Q9C0G0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 AP004609.3-201ENST00000610705 1884 ntBASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF407Q9C0G0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF407Q9C0G0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF407Q9C0G0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF407Q9C0G0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF407Q9C0G0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF407Q9C0G0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 RPS2P7-201ENST00000447334 885 ntBASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.77■■□□□ 1.08
ZNF407Q9C0G0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF407Q9C0G0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
ZNF407Q9C0G0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF407Q9C0G0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF407Q9C0G0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms